Delila Program: patval

patval program

Documentation for the patval program is below, with links to related programs in the "see also" section.

{version = 2.24; (* of patval.p 1994 sep 5}

(* begin module describe.patval *)
      patval: pattern evaluations of aligned sequences

      patval(book: in, inst: in, pattern: in, scaleup: in,
            values: out, output: out)

      book: the book of sequences to be evaluated;
      inst: the instructions generating the book, for alignment;
      pattern: the wmatrix used to evaluate;
      scale: contains one integer, by which the values should be divided
         to bring them into the correct scale if a matrix from rseq was used.
      values: the value of each sequence in the book;
      output: for messages to the user.

      Patval uses a pattern matrix (the output of patlrn) to evaluate a
      book of aligned sequences.

see also
      patlrn.p, patser.p, patlst.p, patana.p

      Gary D. Stormo

      none known

(* end module describe.patval *)
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