rebasec program

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• Pascal source code: rebasec.p (wget instructions)
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Documentation for the rebasec program is below, with links to related programs in the "see also" section.

{   version = 1.00; (* of rebasec.p 2019 Sep 08}

(* begin module describe.rebasec *)
(*
name
   rebasec: convert restriction enzyme list to dimensionality

synopsis
   rebasec(enzymelist: in, data: out, output: out)

files
   enzymelist: a simple list of restriction enzymes with only alphabetic
       characters, one per line.

       The data could be from Rich Roberts' restriction enzyme
       database, REBASE

   data: Twice Rsequence for each enzyme.  Columns:
        DNA sequence
        b bases
        R bits
        D dimensionality
     Lines that begin with '*' are comments.
   output: messages to the user

description

   Take a raw list of restriction enzyme sites and convert

   into its dimensionality, D = 2 Rsequence.  The genhis program can
   then be used to generate a histogram using the third column.

   The list could come from Rich Robert's restriction enzyme database.

examples

documentation

   The enzymelist file is available from
   ftp://vent.neb.com/pub/rebase/enzymelist*.

see also
   genhis.p
   rebased.p

   ftp://vent.neb.com/pub/rebase/

author
   Thomas Dana Schneider

bugs

technical notes

*)
(* end module describe.rebasec *)
{This manual page was created by makman 1.45}