Libdef: Definition of the Delila Language

Delila ( DEoxyribonucleic acid LIbrary LAnguage) is a language for extracting sets of sequence fragments from a database. This is the formal definition I work with to define the language and data structure. There is now an example library and extensive instruction testing. The files are:

• libdef: The definition of Delila libraries and Delila instructions.
• libdef.lib1: An example Delila library.
• libdef.inst: Example Delila instructions for extractions and with mutations from libdef.lib1.
• libdef.test.script: A Unix csh script for doing the test. Note that it uses wget to grab the necessary files. You must have Delila, Lister (contract version) and ghostview running on your machine.
• libdef.clean: A Unix csh script that cleans up all the files generated by the test (but it leaves itself and the test script :-).

• One Web Page with all images (LONG!!)
• One Web Page containing an index of all images
• PostScript

See also:

Philosophy and Definition for a Universal Genetic Sequence Database

Schneider Lab