define "NC_000913.betT" "-" "<]" "[>" 0 2033 @ NC_000913 328687 1 "NC_000913.betT" "" define "NC_000913.yahA" "-" "<]" "[>" 0 1088 @ NC_000913 331595 1 "NC_000913.yahA" "" * orf 1.24 * 2007/12/07 19:30:59, 2007/12/06 18:15:19, small proteins E.coli-K12 NC_000913 betT_yahA define "orf" "#" "<]" "[>" 0.0 2.0 * multiscan 3.94 define "ir" " w" " " " " -3.0 14.0 ribl "ir" * Ri 2.66 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.40; encoding of sequences in ** * 2001/08/15 12:20:50, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2001/08/15 12:20:50, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -3 14 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -3 14 frombase, tobase 0.763679 -0.567865 -0.078059 -0.559121 -3 1656 658 924 662 0.060296 0.121401 -0.896385 0.412266 -2 1017 1061 524 1298 0.115951 0.077219 -0.700990 0.315744 -1 1057 1029 600 1214 1.864201 -9.929808 -1.710640 -4.285952 0 3551 1 298 50 -9.930548 -9.930548 -9.930548 1.999450 1 0 0 0 3900 -9.930548 -9.930548 1.999450 -9.930548 2 0 0 3900 0 0.980085 -0.684256 -0.271597 -0.797951 3 1924 607 808 561 0.577986 0.185235 -0.610136 -0.486865 4 1456 1109 639 696 0.421131 -0.371388 -0.649038 0.320490 5 1306 754 622 1218 0.761063 -0.222449 -0.164937 -0.850324 6 1653 836 870 541 0.760190 -0.361852 -0.990229 0.033088 7 1652 759 491 998 0.327579 -0.404288 -0.227636 0.181327 8 1224 737 833 1106 0.511061 -0.074940 -0.356161 -0.246814 9 1390 926 762 822 0.320490 -0.232841 -1.013929 0.489098 10 1218 830 483 1369 0.361362 -0.236321 -0.539639 0.235099 11 1253 828 671 1148 0.516241 -0.161624 -0.127292 -0.398427 12 1395 872 893 740 0.262484 -0.145174 -1.056364 0.499598 13 1170 882 469 1379 0.129536 -0.173252 -0.456103 0.365961 14 1067 865 711 1257 * 6.721797 bits = mean (Rsequence of selected region) 2.259310 bits = standard deviation * 13.926145 bits = Ri of consensus sequence from -3 to 14 -40.078734 bits = Ri of anticonsensus sequence from -3 to 14 * -18.663794 bits = average Ri for random sequence from -3 to 14 * 3900 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * l extreme: char; h or l, the high or low extreme to be defined 0.0 wavelocation: real; the location in bases of the extreme 1.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . * multiscan 3.94 define "sd" " w" " " " " -12.0 4.0 ribl "sd" * Ri 2.66 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.40; encoding of sequences in ** * 2001/08/15 12:19:55, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2001/08/15 12:19:55, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -12 4 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -12 4 frombase, tobase 0.217397 -0.146810 -0.422014 0.246365 -12 1134 881 728 1157 0.214850 -0.225905 -0.493097 0.347479 -11 1132 834 693 1241 0.297808 -0.264472 -0.556943 0.329935 -10 1199 812 663 1226 0.335807 -0.201888 -0.667714 0.307402 -9 1231 848 614 1207 0.365961 -0.269813 -0.732592 0.354437 -8 1257 809 587 1247 0.390992 -0.260923 -0.644406 0.278426 -7 1279 814 624 1183 0.470004 -0.384844 -0.663022 0.282080 -6 1351 747 616 1186 0.534737 -0.443979 -0.628312 0.223744 -5 1413 717 631 1139 0.518308 -0.482725 -0.693794 0.301413 -4 1397 698 603 1202 0.728403 0.107739 0.058876 -2.168257 -3 1616 1051 1016 217 1.215487 -1.382914 -0.412139 -0.885414 -2 2265 374 733 528 -1.993170 -4.122453 1.824244 -2.749899 -1 245 56 3454 145 -9.930548 -9.930548 1.999450 -9.930548 0 0 0 3900 0 1.567045 -1.677143 -9.930548 -0.468329 1 2890 305 0 705 0.187835 -1.739984 0.884774 -0.486865 2 1111 292 1801 696 0.657969 -0.888149 -0.404288 0.169539 3 1539 527 737 1097 0.550982 -0.390650 -0.468329 0.067371 4 1429 744 705 1022 * 5.801573 bits = mean (Rsequence of selected region) 2.550546 bits = standard deviation * 12.967941 bits = Ri of consensus sequence from -12 to 4 -36.133077 bits = Ri of anticonsensus sequence from -12 to 4 * -13.026643 bits = average Ri for random sequence from -12 to 4 * 3900 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * l extreme: char; h or l, the high or low extreme to be defined 0.0 wavelocation: real; the location in bases of the extreme 1.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . @ NC_000913 330958.0 +1 "ir" "betT_yahA+" 8.110441 0.614632 0.269399 @ NC_000913 331042.0 +1 "orf" "29 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 330949.0 +1 "sd" "" 0.065729 -2.248869 0.012260 define "sd-(9)-ir 330958 Gap" "-" "{}" "{}" 0.0 9.0 @ NC_000913 330949.0 +1 "sd-(9)-ir 330958 Gap" "2.3 bits" 2.279003 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 330958 betT_yahA+ total 5.9" "-" "||" "||" -9.0 0.0 @ NC_000913 330958.0 +1 "sd-ir 330958 betT_yahA+ total 5.9" "bits" 5.897167 29.000000 331042.000000 1.000000 -> [ir], [sd] @ NC_000913 330965.0 +1 "ir" "betT_yahA+" 6.902540 0.079999 0.468119 @ NC_000913 331010.0 +1 "orf" "16 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 330960.0 +1 "sd" "" 5.292999 -0.199398 0.420976 define "sd-(5)-ir 330965 Gap" "-" "{}" "{}" 0.0 5.0 @ NC_000913 330960.0 +1 "sd-(5)-ir 330965 Gap" "5.4 bits" 5.408286 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 330965 betT_yahA+ total 6.8" "-" "||" "||" -5.0 0.0 @ NC_000913 330965.0 +1 "sd-ir 330965 betT_yahA+ total 6.8" "bits" 6.787253 16.000000 331010.000000 1.000000 -> [ir], [sd] @ NC_000913 331026.0 +1 "ir" "betT_yahA+" 3.321232 -1.505134 0.066145 @ NC_000913 331098.0 +1 "orf" "25 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 331014.0 +1 "sd" "" 7.429880 0.638415 0.261602 define "sd-(12)-ir 331026 Gap" "-" "{}" "{}" 0.0 12.0 @ NC_000913 331014.0 +1 "sd-(12)-ir 331026 Gap" "4.0 bits" 3.966064 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 331026 betT_yahA+ total 6.8" "-" "||" "||" -12.0 0.0 @ NC_000913 331026.0 +1 "sd-ir 331026 betT_yahA+ total 6.8" "bits" 6.785048 25.000000 331098.000000 1.000000 -> [ir], [sd] @ NC_000913 331116.0 +1 "ir" "betT_yahA+" 5.847924 -0.386788 0.349457 @ NC_000913 331191.0 +1 "orf" "26 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 331104.0 +1 "sd" "" 4.906526 -0.350924 0.362823 define "sd-(12)-ir 331116 Gap" "-" "{}" "{}" 0.0 12.0 @ NC_000913 331104.0 +1 "sd-(12)-ir 331116 Gap" "4.0 bits" 3.966064 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 331116 betT_yahA+ total 6.8" "-" "||" "||" -12.0 0.0 @ NC_000913 331116.0 +1 "sd-ir 331116 betT_yahA+ total 6.8" "bits" 6.788386 26.000000 331191.000000 1.000000 -> [ir], [sd] @ NC_000913 331149.0 +1 "ir" "betT_yahA+" 7.123600 0.177843 0.429423 @ NC_000913 331191.0 +1 "orf" "15 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 331139.0 +1 "sd" "" 4.586248 -0.476496 0.316861 define "sd-(10)-ir 331149 Gap" "-" "{}" "{}" 0.0 10.0 @ NC_000913 331139.0 +1 "sd-(10)-ir 331149 Gap" "2.7 bits" 2.719960 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 331149 betT_yahA+ total 9.0" "-" "||" "||" -10.0 0.0 @ NC_000913 331149.0 +1 "sd-ir 331149 betT_yahA+ total 9.0" "bits" 8.989888 15.000000 331191.000000 1.000000 -> [ir], [sd] @ NC_000913 331158.0 +1 "ir" "betT_yahA+" 7.119513 0.176034 0.430134 @ NC_000913 331191.0 +1 "orf" "12 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 331151.0 +1 "sd" "" 2.362891 -1.348214 0.088795 define "sd-(7)-ir 331158 Gap" "-" "{}" "{}" 0.0 7.0 @ NC_000913 331151.0 +1 "sd-(7)-ir 331158 Gap" "3.7 bits" 3.703029 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 331158 betT_yahA+ total 5.8" "-" "||" "||" -7.0 0.0 @ NC_000913 331158.0 +1 "sd-ir 331158 betT_yahA+ total 5.8" "bits" 5.779375 12.000000 331191.000000 1.000000 -> [ir], [sd] @ NC_000913 331290.0 +1 "ir" "betT_yahA+" 4.816438 -0.843337 0.199520 @ NC_000913 331293.0 +1 "orf" "2 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 331281.0 +1 "sd" "" 4.041378 -0.690125 0.245058 define "sd-(9)-ir 331290 Gap" "-" "{}" "{}" 0.0 9.0 @ NC_000913 331281.0 +1 "sd-(9)-ir 331290 Gap" "2.3 bits" 2.279003 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 331290 betT_yahA+ total 6.6" "-" "||" "||" -9.0 0.0 @ NC_000913 331290.0 +1 "sd-ir 331290 betT_yahA+ total 6.6" "bits" 6.578813 2.000000 331293.000000 0.000000 -> [ir], [sd] @ NC_000913 331510.0 +1 "ir" "betT_yahA+" 5.174552 -0.684831 0.246725 @ NC_000913 331552.0 +1 "orf" "15 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 331501.0 +1 "sd" "" 2.581157 -1.262638 0.103360 define "sd-(9)-ir 331510 Gap" "-" "{}" "{}" 0.0 9.0 @ NC_000913 331501.0 +1 "sd-(9)-ir 331510 Gap" "2.3 bits" 2.279003 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 331510 betT_yahA+ total 5.5" "-" "||" "||" -9.0 0.0 @ NC_000913 331510.0 +1 "sd-ir 331510 betT_yahA+ total 5.5" "bits" 5.476706 15.000000 331552.000000 1.000000 -> [ir], [sd] @ NC_000913 331529.0 +1 "ir" "betT_yahA+" 4.560826 -0.956474 0.169416 @ NC_000913 331565.0 +1 "orf" "13 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 331519.0 +1 "sd" "" 3.475609 -0.911947 0.180898 define "sd-(10)-ir 331529 Gap" "-" "{}" "{}" 0.0 10.0 @ NC_000913 331519.0 +1 "sd-(10)-ir 331529 Gap" "2.7 bits" 2.719960 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 331529 betT_yahA+ total 5.3" "-" "||" "||" -10.0 0.0 @ NC_000913 331529.0 +1 "sd-ir 331529 betT_yahA+ total 5.3" "bits" 5.316475 13.000000 331565.000000 1.000000 -> [ir], [sd] @ NC_000913 331595.0 +1 "ir" "betT_yahA+" 6.262938 -0.203097 0.419530 @ NC_000913 331587.0 +1 "sd" "" 7.913680 0.828100 0.203807 define "sd-(8)-ir 331595 Gap" "-" "{}" "{}" 0.0 8.0 @ NC_000913 331587.0 +1 "sd-(8)-ir 331595 Gap" "2.4 bits" 2.446019 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 331595 betT_yahA+ total 11.7" "-" "||" "||" -8.0 0.0 @ NC_000913 331595.0 +1 "sd-ir 331595 betT_yahA+ total 11.7" "bits" 11.730599 0.000000 0.000000 0.000000 -> [ir], [sd] * * 1 sequences are in the genomebook * 9 ORFs are in the genomebook * multiscan 3.94 * 2007/12/07 19:30:59, 2007/12/06 18:15:19, small proteins E.coli-K12 NC_000913 betT_yahA define "p10" " w" " " " " -1.0 4.0 ribl "p10" * Ri 2.69 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.41; encoding of sequences in ** * 2003/04/23 22:04:54, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2003/04/23 22:04:54, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -1 4 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -1 4 frombase, tobase -2.129296 -1.226594 -2.404931 1.650922 -1 23 43 19 316 1.890173 -6.660036 -5.067896 -2.009002 0 373 0 3 25 0.061387 -0.608464 -0.980433 0.830957 1 105 66 51 179 1.061387 -0.980433 -0.871499 -0.243467 2 210 51 55 85 1.061387 -0.052946 -1.443405 -0.819968 3 210 97 37 57 -6.660036 -2.404931 -3.193427 1.882417 4 0 19 11 371 * 4.783894 bits = mean (Rsequence of selected region) 2.128061 bits = standard deviation * 8.377244 bits = Ri of consensus sequence from -1 to 4 -19.129274 bits = Ri of anticonsensus sequence from -1 to 4 * -7.329533 bits = average Ri for random sequence from -1 to 4 * 401 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * l extreme: char; h or l, the high or low extreme to be defined 4.0 wavelocation: real; the location in bases of the extreme 1.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . * multiscan 3.94 * 2007/12/07 19:30:59, 2007/12/06 18:15:19, small proteins E.coli-K12 NC_000913 betT_yahA define "p35" " w" " " " " -1.0 4.0 ribl "p35" * Ri 2.69 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.41; encoding of sequences in ** * 2003/04/23 22:05:06, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2003/04/23 22:05:06, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -1 4 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -1 4 frombase, tobase -1.260541 -6.660036 -6.660036 1.834982 -1 42 0 0 359 -2.482933 -6.660036 -0.482933 1.627912 0 18 0 72 311 -2.482933 -4.067896 1.277879 0.402424 1 18 6 244 133 0.781770 0.423957 -6.660036 -0.113700 2 173 135 0 93 0.496889 0.476425 -1.330930 -0.349078 3 142 140 40 79 0.413231 -1.009002 -0.482933 0.527051 4 134 50 72 145 * 4.024391 bits = mean (Rsequence of selected region) 1.878152 bits = standard deviation * 6.546482 bits = Ri of consensus sequence from -1 to 4 -26.387937 bits = Ri of anticonsensus sequence from -1 to 4 * -8.110127 bits = average Ri for random sequence from -1 to 4 * 401 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * h extreme: char; h or l, the high or low extreme to be defined -1.0 wavelocation: real; the location in bases of the extreme 2.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . @ NC_000913 330800.0 +1 "p10" " 0.3 bits" 0.273106 -2.119670 0.017017 @ NC_000913 330777.0 +1 "p35" " 5.6 bits" 5.586696 0.831831 0.202752 define "p35-(23)-p10 330800 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 330777.0 1 "p35-(23)-p10 330800 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 330800 total 4.4" "-" "||" "||" -23 0 @ NC_000913 330800 1 "p35-p10 330800 total 4.4" "bits" 4.422518 0.000000 0.000000 @ NC_000913 330808.0 +1 "p10" " 5.3 bits" 5.260999 0.224197 0.411302 @ NC_000913 330785.0 +1 "p35" " 1.9 bits" 1.890201 -1.136324 0.127910 define "p35-(23)-p10 330808 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 330785.0 1 "p35-(23)-p10 330808 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 330808 total 5.7" "-" "||" "||" -23 0 @ NC_000913 330808 1 "p35-p10 330808 total 5.7" "bits" 5.713916 0.000000 0.000000 @ NC_000913 330918.0 +1 "p10" " 3.8 bits" 3.798027 -0.463270 0.321585 @ NC_000913 330895.0 +1 "p35" " 2.5 bits" 2.530429 -0.795443 0.213178 define "p35-(23)-p10 330918 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 330895.0 1 "p35-(23)-p10 330918 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 330918 total 4.9" "-" "||" "||" -23 0 @ NC_000913 330918 1 "p35-p10 330918 total 4.9" "bits" 4.891172 0.000000 0.000000 @ NC_000913 330951.0 +1 "p10" " 4.2 bits" 4.194873 -0.276788 0.390972 @ NC_000913 330929.0 +1 "p35" " 4.3 bits" 4.332719 0.164166 0.434800 define "p35-(22)-p10 330951 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 330929.0 1 "p35-(22)-p10 330951 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 330951 total 6.2" "-" "||" "||" -22 0 @ NC_000913 330951 1 "p35-p10 330951 total 6.2" "bits" 6.193067 0.000000 0.000000 @ NC_000913 330964.0 +1 "p10" " 0.0 bits" 0.017809 -2.239637 0.012557 @ NC_000913 330940.0 +1 "p35" " 6.4 bits" 6.432663 1.282256 0.099876 define "p35-(24)-p10 330964 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 330940.0 1 "p35-(24)-p10 330964 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 330964 total 4.0" "-" "||" "||" -24 0 @ NC_000913 330964 1 "p35-p10 330964 total 4.0" "bits" 4.022838 0.000000 0.000000 @ NC_000913 331033.0 +1 "p10" " 2.4 bits" 2.440035 -1.101406 0.135360 @ NC_000913 331009.0 +1 "p35" " 4.7 bits" 4.661044 0.338978 0.367313 define "p35-(24)-p10 331033 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 331009.0 1 "p35-(24)-p10 331033 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 331033 total 4.7" "-" "||" "||" -24 0 @ NC_000913 331033 1 "p35-p10 331033 total 4.7" "bits" 4.673445 0.000000 0.000000 @ NC_000913 331035.0 +1 "p10" " 5.2 bits" 5.191034 0.191320 0.424138 @ NC_000913 331009.0 +1 "p35" " 4.7 bits" 4.661044 0.338978 0.367313 define "p35-(26)-p10 331035 Gap" "-" "{}" "{}" 0.0 26 @ NC_000913 331009.0 1 "p35-(26)-p10 331035 Gap" "3.7 bits" 3.702256 1.428290 4.003602 define "p35-p10 331035 total 6.1" "-" "||" "||" -26 0 @ NC_000913 331035 1 "p35-p10 331035 total 6.1" "bits" 6.149822 0.000000 0.000000 @ NC_000913 331037.0 +1 "p10" " 3.2 bits" 3.173214 -0.756877 0.224562 @ NC_000913 331016.0 +1 "p35" " 5.7 bits" 5.671028 0.876733 0.190316 define "p35-(21)-p10 331037 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 331016.0 1 "p35-(21)-p10 331037 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 331037 total 5.5" "-" "||" "||" -21 0 @ NC_000913 331037 1 "p35-p10 331037 total 5.5" "bits" 5.545341 0.000000 0.000000 @ NC_000913 331038.0 +1 "p10" " 2.6 bits" 2.596713 -1.027781 0.152026 @ NC_000913 331016.0 +1 "p35" " 5.7 bits" 5.671028 0.876733 0.190316 define "p35-(22)-p10 331038 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 331016.0 1 "p35-(22)-p10 331038 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 331038 total 5.9" "-" "||" "||" -22 0 @ NC_000913 331038 1 "p35-p10 331038 total 5.9" "bits" 5.933216 0.000000 0.000000 @ NC_000913 331042.0 +1 "p10" " 2.7 bits" 2.666678 -0.994904 0.159892 @ NC_000913 331016.0 +1 "p35" " 5.7 bits" 5.671028 0.876733 0.190316 define "p35-(26)-p10 331042 Gap" "-" "{}" "{}" 0.0 26 @ NC_000913 331016.0 1 "p35-(26)-p10 331042 Gap" "3.7 bits" 3.702256 1.428290 4.003602 define "p35-p10 331042 total 4.6" "-" "||" "||" -26 0 @ NC_000913 331042 1 "p35-p10 331042 total 4.6" "bits" 4.635450 0.000000 0.000000 @ NC_000913 331062.0 +1 "p10" " 3.2 bits" 3.173214 -0.756877 0.224562 @ NC_000913 331038.0 +1 "p35" " 4.8 bits" 4.825061 0.426307 0.334942 define "p35-(24)-p10 331062 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 331038.0 1 "p35-(24)-p10 331062 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 331062 total 5.6" "-" "||" "||" -24 0 @ NC_000913 331062 1 "p35-p10 331062 total 5.6" "bits" 5.570641 0.000000 0.000000 @ NC_000913 331063.0 +1 "p10" " 2.6 bits" 2.596713 -1.027781 0.152026 @ NC_000913 331042.0 +1 "p35" " 6.5 bits" 6.546483 1.342858 0.089659 define "p35-(21)-p10 331063 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 331042.0 1 "p35-(21)-p10 331063 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 331063 total 5.8" "-" "||" "||" -21 0 @ NC_000913 331063 1 "p35-p10 331063 total 5.8" "bits" 5.844295 0.000000 0.000000 @ NC_000913 331077.0 +1 "p10" " 8.4 bits" 8.377243 1.688555 0.045652 @ NC_000913 331051.0 +1 "p35" " 2.8 bits" 2.785671 -0.659542 0.254774 define "p35-(26)-p10 331077 Gap" "-" "{}" "{}" 0.0 26 @ NC_000913 331051.0 1 "p35-(26)-p10 331077 Gap" "3.7 bits" 3.702256 1.428290 4.003602 define "p35-p10 331077 total 7.5" "-" "||" "||" -26 0 @ NC_000913 331077 1 "p35-p10 331077 total 7.5" "bits" 7.460658 0.000000 0.000000 @ NC_000913 331079.0 +1 "p10" " 6.3 bits" 6.302819 0.713760 0.237688 @ NC_000913 331058.0 +1 "p35" " 4.8 bits" 4.805046 0.415651 0.338833 define "p35-(21)-p10 331079 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 331058.0 1 "p35-(21)-p10 331079 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 331079 total 7.8" "-" "||" "||" -21 0 @ NC_000913 331079 1 "p35-p10 331079 total 7.8" "bits" 7.808964 0.000000 0.000000 @ NC_000913 331080.0 +1 "p10" " 2.7 bits" 2.715670 -0.971882 0.165555 @ NC_000913 331058.0 +1 "p35" " 4.8 bits" 4.805046 0.415651 0.338833 define "p35-(22)-p10 331080 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 331058.0 1 "p35-(22)-p10 331080 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 331080 total 5.2" "-" "||" "||" -22 0 @ NC_000913 331080 1 "p35-p10 331080 total 5.2" "bits" 5.186191 0.000000 0.000000 @ NC_000913 331089.0 +1 "p10" " 6.3 bits" 6.335423 0.729081 0.232976 @ NC_000913 331063.0 +1 "p35" " 4.8 bits" 4.825061 0.426307 0.334942 define "p35-(26)-p10 331089 Gap" "-" "{}" "{}" 0.0 26 @ NC_000913 331063.0 1 "p35-(26)-p10 331089 Gap" "3.7 bits" 3.702256 1.428290 4.003602 define "p35-p10 331089 total 7.5" "-" "||" "||" -26 0 @ NC_000913 331089 1 "p35-p10 331089 total 7.5" "bits" 7.458228 0.000000 0.000000 @ NC_000913 331149.0 +1 "p10" " 2.7 bits" 2.664139 -0.996097 0.159602 @ NC_000913 331126.0 +1 "p35" " 3.8 bits" 3.815771 -0.111077 0.455778 define "p35-(23)-p10 331149 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 331126.0 1 "p35-(23)-p10 331149 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 331149 total 5.0" "-" "||" "||" -23 0 @ NC_000913 331149 1 "p35-p10 331149 total 5.0" "bits" 5.042626 0.000000 0.000000 @ NC_000913 331181.0 +1 "p10" " 4.2 bits" 4.194873 -0.276788 0.390972 @ NC_000913 331159.0 +1 "p35" " 3.1 bits" 3.093147 -0.495830 0.310007 define "p35-(22)-p10 331181 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 331159.0 1 "p35-(22)-p10 331181 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 331181 total 5.0" "-" "||" "||" -22 0 @ NC_000913 331181 1 "p35-p10 331181 total 5.0" "bits" 4.953495 0.000000 0.000000 @ NC_000913 331213.0 +1 "p10" " 1.4 bits" 1.368513 -1.604926 0.054255 @ NC_000913 331191.0 +1 "p35" " 6.5 bits" 6.546483 1.342858 0.089659 define "p35-(22)-p10 331213 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 331191.0 1 "p35-(22)-p10 331213 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 331213 total 5.6" "-" "||" "||" -22 0 @ NC_000913 331213 1 "p35-p10 331213 total 5.6" "bits" 5.580471 0.000000 0.000000 @ NC_000913 331249.0 +1 "p10" " 5.7 bits" 5.726318 0.442856 0.328935 @ NC_000913 331228.0 +1 "p35" " 4.6 bits" 4.641274 0.328452 0.371285 define "p35-(21)-p10 331249 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 331228.0 1 "p35-(21)-p10 331249 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 331249 total 7.1" "-" "||" "||" -21 0 @ NC_000913 331249 1 "p35-p10 331249 total 7.1" "bits" 7.068691 0.000000 0.000000 @ NC_000913 331257.0 +1 "p10" " 8.4 bits" 8.377243 1.688555 0.045652 @ NC_000913 331235.0 +1 "p35" " 4.2 bits" 4.164463 0.074580 0.470275 define "p35-(22)-p10 331257 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 331235.0 1 "p35-(22)-p10 331257 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 331257 total 10.2" "-" "||" "||" -22 0 @ NC_000913 331257 1 "p35-p10 331257 total 10.2" "bits" 10.207181 0.000000 0.000000 @ NC_000913 331268.0 +1 "p10" " 1.4 bits" 1.430849 -1.575634 0.057555 @ NC_000913 331245.0 +1 "p35" " 4.7 bits" 4.691226 0.355048 0.361277 define "p35-(23)-p10 331268 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 331245.0 1 "p35-(23)-p10 331268 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 331268 total 4.7" "-" "||" "||" -23 0 @ NC_000913 331268 1 "p35-p10 331268 total 4.7" "bits" 4.684791 0.000000 0.000000 @ NC_000913 331334.0 +1 "p10" " 2.6 bits" 2.596713 -1.027781 0.152026 @ NC_000913 331313.0 +1 "p35" " 6.4 bits" 6.432663 1.282256 0.099876 define "p35-(21)-p10 331334 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 331313.0 1 "p35-(21)-p10 331334 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 331334 total 5.7" "-" "||" "||" -21 0 @ NC_000913 331334 1 "p35-p10 331334 total 5.7" "bits" 5.730475 0.000000 0.000000 @ NC_000913 331336.0 +1 "p10" " 2.8 bits" 2.785041 -0.939284 0.173793 @ NC_000913 331313.0 +1 "p35" " 6.4 bits" 6.432663 1.282256 0.099876 define "p35-(23)-p10 331336 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 331313.0 1 "p35-(23)-p10 331336 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 331336 total 7.8" "-" "||" "||" -23 0 @ NC_000913 331336 1 "p35-p10 331336 total 7.8" "bits" 7.780420 0.000000 0.000000 @ NC_000913 331361.0 +1 "p10" " 4.5 bits" 4.478068 -0.143711 0.442864 @ NC_000913 331338.0 +1 "p35" " 2.3 bits" 2.293574 -0.921553 0.178381 define "p35-(23)-p10 331361 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 331338.0 1 "p35-(23)-p10 331361 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 331361 total 5.3" "-" "||" "||" -23 0 @ NC_000913 331361 1 "p35-p10 331361 total 5.3" "bits" 5.334358 0.000000 0.000000 @ NC_000913 331363.0 +1 "p10" " 6.3 bits" 6.302819 0.713760 0.237688 @ NC_000913 331338.0 +1 "p35" " 2.3 bits" 2.293574 -0.921553 0.178381 define "p35-(25)-p10 331363 Gap" "-" "{}" "{}" 0.0 25 @ NC_000913 331338.0 1 "p35-(25)-p10 331363 Gap" "4.0 bits" 4.012597 1.428290 4.003602 define "p35-p10 331363 total 4.6" "-" "||" "||" -25 0 @ NC_000913 331363 1 "p35-p10 331363 total 4.6" "bits" 4.583796 0.000000 0.000000 @ NC_000913 331382.0 +1 "p10" " 3.0 bits" 3.016536 -0.830502 0.203128 @ NC_000913 331361.0 +1 "p35" " 5.7 bits" 5.671028 0.876733 0.190316 define "p35-(21)-p10 331382 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 331361.0 1 "p35-(21)-p10 331382 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 331382 total 5.4" "-" "||" "||" -21 0 @ NC_000913 331382 1 "p35-p10 331382 total 5.4" "bits" 5.388663 0.000000 0.000000 @ NC_000913 331384.0 +1 "p10" " 1.3 bits" 1.289311 -1.642144 0.050280 @ NC_000913 331361.0 +1 "p35" " 5.7 bits" 5.671028 0.876733 0.190316 define "p35-(23)-p10 331384 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 331361.0 1 "p35-(23)-p10 331384 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 331384 total 5.5" "-" "||" "||" -23 0 @ NC_000913 331384 1 "p35-p10 331384 total 5.5" "bits" 5.523055 0.000000 0.000000 @ NC_000913 331462.0 +1 "p10" " 4.3 bits" 4.321390 -0.217336 0.413973 @ NC_000913 331440.0 +1 "p35" " 3.2 bits" 3.182611 -0.448196 0.327006 define "p35-(22)-p10 331462 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 331440.0 1 "p35-(22)-p10 331462 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 331462 total 5.2" "-" "||" "||" -22 0 @ NC_000913 331462 1 "p35-p10 331462 total 5.2" "bits" 5.169476 0.000000 0.000000 @ NC_000913 331464.0 +1 "p10" " 5.2 bits" 5.188486 0.190122 0.424607 @ NC_000913 331440.0 +1 "p35" " 3.2 bits" 3.182611 -0.448196 0.327006 define "p35-(24)-p10 331464 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 331440.0 1 "p35-(24)-p10 331464 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 331464 total 5.9" "-" "||" "||" -24 0 @ NC_000913 331464 1 "p35-p10 331464 total 5.9" "bits" 5.943463 0.000000 0.000000 * petalfeatures: color rectangle features for the lister program * version = 2.16 of mkpetals 2007 Dec 07 * format: * el: integer; (* edgelinewidth: edge linewidth (integer) *) * c : char; (* color kind: how color is defined: r for RGB, h for HSB *) * (* ---------------------------------------------- *) * eh: real; (* edgeh: edge hue OR red *) * es: real; (* edges: edge saturation OR blue *) * eb: real; (* edgeb: edge brightness OR green *) * (* ---------------------------------------------- *) * fh: real; (* fillh: fill hue OR red *) * fs: real; (* fills: fill saturation OR blue *) * fb: real; (* fillb: fill brightness OR green *) * (* ---------------------------------------------- *) * spare: real; (* spare *) * "name" el c eh es eb fh fs fb spare * * Determine rgb for full saturation: * hsb is 0.000 1 1.0 * rgb is 1 0 0 petal "ir" -1 h 1.0 0.0 1.0 0.000 -1 1.0 0.0 * * Determine rgb for full saturation: * hsb is 0.250 1 1.0 * rgb is 0.499997914 1 0 petal "sd" -1 h 1.0 0.0 1.0 0.250 -1 1.0 0.0 * * Determine rgb for full saturation: * hsb is 0.500 1 1.0 * rgb is 0 1 1 petal "p10" -1 h 1.0 0.0 1.0 0.500 -1 1.0 0.0 * * Determine rgb for full saturation: * hsb is 0.750 1 1.0 * rgb is 0.499998093 0 1 petal "p35" -1 h 1.0 0.0 1.0 0.750 -1 1.0 0.0