define "NC_000913.hdeD" "-" "<]" "[>" 0 572 @ NC_000913 3655018 1 "NC_000913.hdeD" "" define "NC_000913.gadE" "-" "<]" "[>" 0 527 @ NC_000913 3656389 1 "NC_000913.gadE" "" * orf 1.24 * 2007/12/07 18:45:13, 2007/12/06 18:15:19, small proteins E.coli-K12 NC_000913 hdeD_gadE define "orf" "#" "<]" "[>" 0.0 2.0 * multiscan 3.94 define "ir" " w" " " " " -3.0 14.0 ribl "ir" * Ri 2.66 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.40; encoding of sequences in ** * 2001/08/15 12:20:50, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2001/08/15 12:20:50, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -3 14 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -3 14 frombase, tobase 0.763679 -0.567865 -0.078059 -0.559121 -3 1656 658 924 662 0.060296 0.121401 -0.896385 0.412266 -2 1017 1061 524 1298 0.115951 0.077219 -0.700990 0.315744 -1 1057 1029 600 1214 1.864201 -9.929808 -1.710640 -4.285952 0 3551 1 298 50 -9.930548 -9.930548 -9.930548 1.999450 1 0 0 0 3900 -9.930548 -9.930548 1.999450 -9.930548 2 0 0 3900 0 0.980085 -0.684256 -0.271597 -0.797951 3 1924 607 808 561 0.577986 0.185235 -0.610136 -0.486865 4 1456 1109 639 696 0.421131 -0.371388 -0.649038 0.320490 5 1306 754 622 1218 0.761063 -0.222449 -0.164937 -0.850324 6 1653 836 870 541 0.760190 -0.361852 -0.990229 0.033088 7 1652 759 491 998 0.327579 -0.404288 -0.227636 0.181327 8 1224 737 833 1106 0.511061 -0.074940 -0.356161 -0.246814 9 1390 926 762 822 0.320490 -0.232841 -1.013929 0.489098 10 1218 830 483 1369 0.361362 -0.236321 -0.539639 0.235099 11 1253 828 671 1148 0.516241 -0.161624 -0.127292 -0.398427 12 1395 872 893 740 0.262484 -0.145174 -1.056364 0.499598 13 1170 882 469 1379 0.129536 -0.173252 -0.456103 0.365961 14 1067 865 711 1257 * 6.721797 bits = mean (Rsequence of selected region) 2.259310 bits = standard deviation * 13.926145 bits = Ri of consensus sequence from -3 to 14 -40.078734 bits = Ri of anticonsensus sequence from -3 to 14 * -18.663794 bits = average Ri for random sequence from -3 to 14 * 3900 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * l extreme: char; h or l, the high or low extreme to be defined 0.0 wavelocation: real; the location in bases of the extreme 1.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . * multiscan 3.94 define "sd" " w" " " " " -12.0 4.0 ribl "sd" * Ri 2.66 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.40; encoding of sequences in ** * 2001/08/15 12:19:55, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2001/08/15 12:19:55, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -12 4 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -12 4 frombase, tobase 0.217397 -0.146810 -0.422014 0.246365 -12 1134 881 728 1157 0.214850 -0.225905 -0.493097 0.347479 -11 1132 834 693 1241 0.297808 -0.264472 -0.556943 0.329935 -10 1199 812 663 1226 0.335807 -0.201888 -0.667714 0.307402 -9 1231 848 614 1207 0.365961 -0.269813 -0.732592 0.354437 -8 1257 809 587 1247 0.390992 -0.260923 -0.644406 0.278426 -7 1279 814 624 1183 0.470004 -0.384844 -0.663022 0.282080 -6 1351 747 616 1186 0.534737 -0.443979 -0.628312 0.223744 -5 1413 717 631 1139 0.518308 -0.482725 -0.693794 0.301413 -4 1397 698 603 1202 0.728403 0.107739 0.058876 -2.168257 -3 1616 1051 1016 217 1.215487 -1.382914 -0.412139 -0.885414 -2 2265 374 733 528 -1.993170 -4.122453 1.824244 -2.749899 -1 245 56 3454 145 -9.930548 -9.930548 1.999450 -9.930548 0 0 0 3900 0 1.567045 -1.677143 -9.930548 -0.468329 1 2890 305 0 705 0.187835 -1.739984 0.884774 -0.486865 2 1111 292 1801 696 0.657969 -0.888149 -0.404288 0.169539 3 1539 527 737 1097 0.550982 -0.390650 -0.468329 0.067371 4 1429 744 705 1022 * 5.801573 bits = mean (Rsequence of selected region) 2.550546 bits = standard deviation * 12.967941 bits = Ri of consensus sequence from -12 to 4 -36.133077 bits = Ri of anticonsensus sequence from -12 to 4 * -13.026643 bits = average Ri for random sequence from -12 to 4 * 3900 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * l extreme: char; h or l, the high or low extreme to be defined 0.0 wavelocation: real; the location in bases of the extreme 1.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . @ NC_000913 3655633.0 +1 "ir" "hdeD_gadE+" 8.049679 0.587738 0.278354 @ NC_000913 3655708.0 +1 "orf" "26 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 3655627.0 +1 "sd" "" 1.680844 -1.615626 0.053088 define "sd-(6)-ir 3655633 Gap" "-" "{}" "{}" 0.0 6.0 @ NC_000913 3655627.0 +1 "sd-(6)-ir 3655633 Gap" "4.3 bits" 4.339391 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 3655633 hdeD_gadE+ total 5.4" "-" "||" "||" -6.0 0.0 @ NC_000913 3655633.0 +1 "sd-ir 3655633 hdeD_gadE+ total 5.4" "bits" 5.391132 26.000000 3655708.000000 1.000000 -> [ir], [sd] @ NC_000913 3655971.0 +1 "ir" "hdeD_gadE+" 8.117471 0.617743 0.268372 @ NC_000913 3656007.0 +1 "orf" "13 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 3655965.0 +1 "sd" "" 3.326038 -0.970590 0.165876 define "sd-(6)-ir 3655971 Gap" "-" "{}" "{}" 0.0 6.0 @ NC_000913 3655965.0 +1 "sd-(6)-ir 3655971 Gap" "4.3 bits" 4.339391 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 3655971 hdeD_gadE+ total 7.1" "-" "||" "||" -6.0 0.0 @ NC_000913 3655971.0 +1 "sd-ir 3655971 hdeD_gadE+ total 7.1" "bits" 7.104118 13.000000 3656007.000000 1.000000 -> [ir], [sd] @ NC_000913 3655975.0 +1 "ir" "hdeD_gadE+" 4.409205 -1.023583 0.153016 @ NC_000913 3655993.0 +1 "orf" "7 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 3655965.0 +1 "sd" "" 3.326038 -0.970590 0.165876 define "sd-(10)-ir 3655975 Gap" "-" "{}" "{}" 0.0 10.0 @ NC_000913 3655965.0 +1 "sd-(10)-ir 3655975 Gap" "2.7 bits" 2.719960 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 3655975 hdeD_gadE+ total 5.0" "-" "||" "||" -10.0 0.0 @ NC_000913 3655975.0 +1 "sd-ir 3655975 hdeD_gadE+ total 5.0" "bits" 5.015283 7.000000 3655993.000000 0.000000 -> [ir], [sd] @ NC_000913 3656001.0 +1 "ir" "hdeD_gadE+" 6.005048 -0.317242 0.375530 @ NC_000913 3656007.0 +1 "orf" "3 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 3655992.0 +1 "sd" "" 7.751121 0.764365 0.222325 define "sd-(9)-ir 3656001 Gap" "-" "{}" "{}" 0.0 9.0 @ NC_000913 3655992.0 +1 "sd-(9)-ir 3656001 Gap" "2.3 bits" 2.279003 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 3656001 hdeD_gadE+ total 11.5" "-" "||" "||" -9.0 0.0 @ NC_000913 3656001.0 +1 "sd-ir 3656001 hdeD_gadE+ total 11.5" "bits" 11.477166 3.000000 3656007.000000 0.000000 -> [ir], [sd] @ NC_000913 3656218.0 +1 "ir" "hdeD_gadE+" 3.245564 -1.538626 0.061948 @ NC_000913 3656296.0 +1 "orf" "27 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 3656209.0 +1 "sd" "" 5.134532 -0.261529 0.396842 define "sd-(9)-ir 3656218 Gap" "-" "{}" "{}" 0.0 9.0 @ NC_000913 3656209.0 +1 "sd-(9)-ir 3656218 Gap" "2.3 bits" 2.279003 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 3656218 hdeD_gadE+ total 6.1" "-" "||" "||" -9.0 0.0 @ NC_000913 3656218.0 +1 "sd-ir 3656218 hdeD_gadE+ total 6.1" "bits" 6.101093 27.000000 3656296.000000 1.000000 -> [ir], [sd] @ NC_000913 3656227.0 +1 "ir" "hdeD_gadE+" 2.546008 -1.848259 0.032282 @ NC_000913 3656296.0 +1 "orf" "24 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 3656221.0 +1 "sd" "" 7.615778 0.711301 0.238449 define "sd-(6)-ir 3656227 Gap" "-" "{}" "{}" 0.0 6.0 @ NC_000913 3656221.0 +1 "sd-(6)-ir 3656227 Gap" "4.3 bits" 4.339391 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 3656227 hdeD_gadE+ total 5.8" "-" "||" "||" -6.0 0.0 @ NC_000913 3656227.0 +1 "sd-ir 3656227 hdeD_gadE+ total 5.8" "bits" 5.822395 24.000000 3656296.000000 1.000000 -> [ir], [sd] @ NC_000913 3656230.0 +1 "ir" "hdeD_gadE+" 7.992201 0.562297 0.286957 @ NC_000913 3656296.0 +1 "orf" "23 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 3656221.0 +1 "sd" "" 7.615778 0.711301 0.238449 define "sd-(9)-ir 3656230 Gap" "-" "{}" "{}" 0.0 9.0 @ NC_000913 3656221.0 +1 "sd-(9)-ir 3656230 Gap" "2.3 bits" 2.279003 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 3656230 hdeD_gadE+ total 13.3" "-" "||" "||" -9.0 0.0 @ NC_000913 3656230.0 +1 "sd-ir 3656230 hdeD_gadE+ total 13.3" "bits" 13.328976 23.000000 3656296.000000 1.000000 -> [ir], [sd] @ NC_000913 3656333.0 +1 "ir" "hdeD_gadE+" 7.721082 0.442297 0.329137 @ NC_000913 3656336.0 +1 "orf" "2 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 3656326.0 +1 "sd" "" 2.090283 -1.455096 0.072821 define "sd-(7)-ir 3656333 Gap" "-" "{}" "{}" 0.0 7.0 @ NC_000913 3656326.0 +1 "sd-(7)-ir 3656333 Gap" "3.7 bits" 3.703029 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 3656333 hdeD_gadE+ total 6.1" "-" "||" "||" -7.0 0.0 @ NC_000913 3656333.0 +1 "sd-ir 3656333 hdeD_gadE+ total 6.1" "bits" 6.108336 2.000000 3656336.000000 0.000000 -> [ir], [sd] @ NC_000913 3656342.0 +1 "ir" "hdeD_gadE+" 9.638520 1.290980 0.098355 @ NC_000913 3656369.0 +1 "orf" "10 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 3656332.0 +1 "sd" "" 5.415791 -0.151255 0.439887 define "sd-(10)-ir 3656342 Gap" "-" "{}" "{}" 0.0 10.0 @ NC_000913 3656332.0 +1 "sd-(10)-ir 3656342 Gap" "2.7 bits" 2.719960 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 3656342 hdeD_gadE+ total 12.3" "-" "||" "||" -10.0 0.0 @ NC_000913 3656342.0 +1 "sd-ir 3656342 hdeD_gadE+ total 12.3" "bits" 12.334351 10.000000 3656369.000000 1.000000 -> [ir], [sd] @ NC_000913 3656351.0 +1 "ir" "hdeD_gadE+" 6.596016 -0.055672 0.477801 @ NC_000913 3656369.0 +1 "orf" "7 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 3656344.0 +1 "sd" "" 5.663912 -0.053973 0.478478 define "sd-(7)-ir 3656351 Gap" "-" "{}" "{}" 0.0 7.0 @ NC_000913 3656344.0 +1 "sd-(7)-ir 3656351 Gap" "3.7 bits" 3.703029 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 3656351 hdeD_gadE+ total 8.6" "-" "||" "||" -7.0 0.0 @ NC_000913 3656351.0 +1 "sd-ir 3656351 hdeD_gadE+ total 8.6" "bits" 8.556899 7.000000 3656369.000000 0.000000 -> [ir], [sd] @ NC_000913 3656389.0 +1 "ir" "hdeD_gadE+" 7.428426 0.312763 0.377230 @ NC_000913 3656380.0 +1 "sd" "" 7.360920 0.611378 0.270475 define "sd-(9)-ir 3656389 Gap" "-" "{}" "{}" 0.0 9.0 @ NC_000913 3656380.0 +1 "sd-(9)-ir 3656389 Gap" "2.3 bits" 2.279003 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 3656389 hdeD_gadE+ total 12.5" "-" "||" "||" -9.0 0.0 @ NC_000913 3656389.0 +1 "sd-ir 3656389 hdeD_gadE+ total 12.5" "bits" 12.510343 0.000000 0.000000 0.000000 -> [ir], [sd] * * 1 sequences are in the genomebook * 10 ORFs are in the genomebook * multiscan 3.94 * 2007/12/07 18:45:13, 2007/12/06 18:15:19, small proteins E.coli-K12 NC_000913 hdeD_gadE define "p10" " w" " " " " -1.0 4.0 ribl "p10" * Ri 2.69 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.41; encoding of sequences in ** * 2003/04/23 22:04:54, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2003/04/23 22:04:54, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -1 4 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -1 4 frombase, tobase -2.129296 -1.226594 -2.404931 1.650922 -1 23 43 19 316 1.890173 -6.660036 -5.067896 -2.009002 0 373 0 3 25 0.061387 -0.608464 -0.980433 0.830957 1 105 66 51 179 1.061387 -0.980433 -0.871499 -0.243467 2 210 51 55 85 1.061387 -0.052946 -1.443405 -0.819968 3 210 97 37 57 -6.660036 -2.404931 -3.193427 1.882417 4 0 19 11 371 * 4.783894 bits = mean (Rsequence of selected region) 2.128061 bits = standard deviation * 8.377244 bits = Ri of consensus sequence from -1 to 4 -19.129274 bits = Ri of anticonsensus sequence from -1 to 4 * -7.329533 bits = average Ri for random sequence from -1 to 4 * 401 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * l extreme: char; h or l, the high or low extreme to be defined 4.0 wavelocation: real; the location in bases of the extreme 1.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . * multiscan 3.94 * 2007/12/07 18:45:13, 2007/12/06 18:15:19, small proteins E.coli-K12 NC_000913 hdeD_gadE define "p35" " w" " " " " -1.0 4.0 ribl "p35" * Ri 2.69 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.41; encoding of sequences in ** * 2003/04/23 22:05:06, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2003/04/23 22:05:06, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -1 4 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -1 4 frombase, tobase -1.260541 -6.660036 -6.660036 1.834982 -1 42 0 0 359 -2.482933 -6.660036 -0.482933 1.627912 0 18 0 72 311 -2.482933 -4.067896 1.277879 0.402424 1 18 6 244 133 0.781770 0.423957 -6.660036 -0.113700 2 173 135 0 93 0.496889 0.476425 -1.330930 -0.349078 3 142 140 40 79 0.413231 -1.009002 -0.482933 0.527051 4 134 50 72 145 * 4.024391 bits = mean (Rsequence of selected region) 1.878152 bits = standard deviation * 6.546482 bits = Ri of consensus sequence from -1 to 4 -26.387937 bits = Ri of anticonsensus sequence from -1 to 4 * -8.110127 bits = average Ri for random sequence from -1 to 4 * 401 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * h extreme: char; h or l, the high or low extreme to be defined -1.0 wavelocation: real; the location in bases of the extreme 2.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . @ NC_000913 3655645.0 +1 "p10" " 3.5 bits" 3.482692 -0.611450 0.270451 @ NC_000913 3655623.0 +1 "p35" " 4.7 bits" 4.690532 0.354679 0.361415 define "p35-(22)-p10 3655645 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 3655623.0 1 "p35-(22)-p10 3655645 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 3655645 total 5.8" "-" "||" "||" -22 0 @ NC_000913 3655645 1 "p35-p10 3655645 total 5.8" "bits" 5.838699 0.000000 0.000000 @ NC_000913 3655647.0 +1 "p10" " 4.5 bits" 4.518635 -0.124648 0.450401 @ NC_000913 3655623.0 +1 "p35" " 4.7 bits" 4.690532 0.354679 0.361415 define "p35-(24)-p10 3655647 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 3655623.0 1 "p35-(24)-p10 3655647 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 3655647 total 6.8" "-" "||" "||" -24 0 @ NC_000913 3655647 1 "p35-p10 3655647 total 6.8" "bits" 6.781533 0.000000 0.000000 @ NC_000913 3655713.0 +1 "p10" " 3.0 bits" 3.016536 -0.830502 0.203128 @ NC_000913 3655692.0 +1 "p35" " 6.4 bits" 6.432663 1.282256 0.099876 define "p35-(21)-p10 3655713 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 3655692.0 1 "p35-(21)-p10 3655713 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 3655713 total 6.2" "-" "||" "||" -21 0 @ NC_000913 3655713 1 "p35-p10 3655713 total 6.2" "bits" 6.150298 0.000000 0.000000 @ NC_000913 3655715.0 +1 "p10" " 0.5 bits" 0.522289 -2.002577 0.022611 @ NC_000913 3655692.0 +1 "p35" " 6.4 bits" 6.432663 1.282256 0.099876 define "p35-(23)-p10 3655715 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 3655692.0 1 "p35-(23)-p10 3655715 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 3655715 total 5.5" "-" "||" "||" -23 0 @ NC_000913 3655715 1 "p35-p10 3655715 total 5.5" "bits" 5.517668 0.000000 0.000000 @ NC_000913 3655716.0 +1 "p10" " 0.9 bits" 0.903686 -1.823354 0.034125 @ NC_000913 3655692.0 +1 "p35" " 6.4 bits" 6.432663 1.282256 0.099876 define "p35-(24)-p10 3655716 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 3655692.0 1 "p35-(24)-p10 3655716 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 3655716 total 4.9" "-" "||" "||" -24 0 @ NC_000913 3655716 1 "p35-p10 3655716 total 4.9" "bits" 4.908715 0.000000 0.000000 @ NC_000913 3655740.0 +1 "p10" " 4.4 bits" 4.421464 -0.170310 0.432383 @ NC_000913 3655718.0 +1 "p35" " 5.2 bits" 5.199395 0.625617 0.265783 define "p35-(22)-p10 3655740 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 3655718.0 1 "p35-(22)-p10 3655740 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 3655740 total 7.3" "-" "||" "||" -22 0 @ NC_000913 3655740 1 "p35-p10 3655740 total 7.3" "bits" 7.286334 0.000000 0.000000 @ NC_000913 3655741.0 +1 "p10" " 1.4 bits" 1.410816 -1.585048 0.056478 @ NC_000913 3655718.0 +1 "p35" " 5.2 bits" 5.199395 0.625617 0.265783 define "p35-(23)-p10 3655741 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 3655718.0 1 "p35-(23)-p10 3655741 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 3655741 total 5.2" "-" "||" "||" -23 0 @ NC_000913 3655741 1 "p35-p10 3655741 total 5.2" "bits" 5.172927 0.000000 0.000000 @ NC_000913 3655778.0 +1 "p10" " 4.2 bits" 4.194873 -0.276788 0.390972 @ NC_000913 3655757.0 +1 "p35" " 4.0 bits" 3.964005 -0.032152 0.487175 define "p35-(21)-p10 3655778 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 3655757.0 1 "p35-(21)-p10 3655778 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 3655778 total 4.9" "-" "||" "||" -21 0 @ NC_000913 3655778 1 "p35-p10 3655778 total 4.9" "bits" 4.859977 0.000000 0.000000 @ NC_000913 3655781.0 +1 "p10" " 6.3 bits" 6.335423 0.729081 0.232976 @ NC_000913 3655757.0 +1 "p35" " 4.0 bits" 3.964005 -0.032152 0.487175 define "p35-(24)-p10 3655781 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 3655757.0 1 "p35-(24)-p10 3655781 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 3655781 total 7.9" "-" "||" "||" -24 0 @ NC_000913 3655781 1 "p35-p10 3655781 total 7.9" "bits" 7.871794 0.000000 0.000000 @ NC_000913 3655793.0 +1 "p10" " 5.2 bits" 5.191034 0.191320 0.424138 @ NC_000913 3655771.0 +1 "p35" " 5.2 bits" 5.199395 0.625617 0.265783 define "p35-(22)-p10 3655793 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 3655771.0 1 "p35-(22)-p10 3655793 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 3655793 total 8.1" "-" "||" "||" -22 0 @ NC_000913 3655793 1 "p35-p10 3655793 total 8.1" "bits" 8.055904 0.000000 0.000000 @ NC_000913 3655810.0 +1 "p10" " 4.5 bits" 4.478068 -0.143711 0.442864 @ NC_000913 3655786.0 +1 "p35" " 2.2 bits" 2.221874 -0.959729 0.168596 define "p35-(24)-p10 3655810 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 3655786.0 1 "p35-(24)-p10 3655810 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 3655810 total 4.3" "-" "||" "||" -24 0 @ NC_000913 3655810 1 "p35-p10 3655810 total 4.3" "bits" 4.272308 0.000000 0.000000 @ NC_000913 3655820.0 +1 "p10" " 2.5 bits" 2.531829 -1.058271 0.144966 @ NC_000913 3655796.0 +1 "p35" " 4.3 bits" 4.282767 0.137569 0.445290 define "p35-(24)-p10 3655820 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 3655796.0 1 "p35-(24)-p10 3655820 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 3655820 total 4.4" "-" "||" "||" -24 0 @ NC_000913 3655820 1 "p35-p10 3655820 total 4.4" "bits" 4.386962 0.000000 0.000000 @ NC_000913 3655834.0 +1 "p10" " 1.0 bits" 1.047028 -1.755996 0.039545 @ NC_000913 3655810.0 +1 "p35" " 5.7 bits" 5.671028 0.876733 0.190316 define "p35-(24)-p10 3655834 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 3655810.0 1 "p35-(24)-p10 3655834 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 3655834 total 4.3" "-" "||" "||" -24 0 @ NC_000913 3655834 1 "p35-p10 3655834 total 4.3" "bits" 4.290422 0.000000 0.000000 @ NC_000913 3655921.0 +1 "p10" " 5.1 bits" 5.056467 0.128085 0.449041 @ NC_000913 3655899.0 +1 "p35" " 3.9 bits" 3.929591 -0.050475 0.479872 define "p35-(22)-p10 3655921 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 3655899.0 1 "p35-(22)-p10 3655921 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 3655921 total 6.7" "-" "||" "||" -22 0 @ NC_000913 3655921 1 "p35-p10 3655921 total 6.7" "bits" 6.651533 0.000000 0.000000 @ NC_000913 3655994.0 +1 "p10" " 4.4 bits" 4.421464 -0.170310 0.432383 @ NC_000913 3655972.0 +1 "p35" " 3.5 bits" 3.450960 -0.305317 0.380063 define "p35-(22)-p10 3655994 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 3655972.0 1 "p35-(22)-p10 3655994 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 3655994 total 5.5" "-" "||" "||" -22 0 @ NC_000913 3655994 1 "p35-p10 3655994 total 5.5" "bits" 5.537899 0.000000 0.000000 @ NC_000913 3656008.0 +1 "p10" " 2.5 bits" 2.531829 -1.058271 0.144966 @ NC_000913 3655984.0 +1 "p35" " 5.7 bits" 5.650564 0.865837 0.193290 define "p35-(24)-p10 3656008 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 3655984.0 1 "p35-(24)-p10 3656008 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 3656008 total 5.8" "-" "||" "||" -24 0 @ NC_000913 3656008 1 "p35-p10 3656008 total 5.8" "bits" 5.754759 0.000000 0.000000 @ NC_000913 3656053.0 +1 "p10" " 1.4 bits" 1.395667 -1.592166 0.055674 @ NC_000913 3656030.0 +1 "p35" " 6.1 bits" 6.054386 1.080847 0.139883 define "p35-(23)-p10 3656053 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 3656030.0 1 "p35-(23)-p10 3656053 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 3656053 total 6.0" "-" "||" "||" -23 0 @ NC_000913 3656053 1 "p35-p10 3656053 total 6.0" "bits" 6.012769 0.000000 0.000000 @ NC_000913 3656087.0 +1 "p10" " 2.0 bits" 1.973276 -1.320741 0.093294 @ NC_000913 3656064.0 +1 "p35" " 5.6 bits" 5.557208 0.816130 0.207213 define "p35-(23)-p10 3656087 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 3656064.0 1 "p35-(23)-p10 3656087 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 3656087 total 6.1" "-" "||" "||" -23 0 @ NC_000913 3656087 1 "p35-p10 3656087 total 6.1" "bits" 6.093200 0.000000 0.000000 @ NC_000913 3656095.0 +1 "p10" " 6.0 bits" 5.958056 0.551752 0.290559 @ NC_000913 3656074.0 +1 "p35" " 2.4 bits" 2.441221 -0.842940 0.199631 define "p35-(21)-p10 3656095 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 3656074.0 1 "p35-(21)-p10 3656095 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 3656095 total 5.1" "-" "||" "||" -21 0 @ NC_000913 3656095 1 "p35-p10 3656095 total 5.1" "bits" 5.100376 0.000000 0.000000 @ NC_000913 3656111.0 +1 "p10" " 3.6 bits" 3.615824 -0.548889 0.291541 @ NC_000913 3656087.0 +1 "p35" " 3.8 bits" 3.843209 -0.096468 0.461574 define "p35-(24)-p10 3656111 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 3656087.0 1 "p35-(24)-p10 3656111 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 3656111 total 5.0" "-" "||" "||" -24 0 @ NC_000913 3656111 1 "p35-p10 3656111 total 5.0" "bits" 5.031399 0.000000 0.000000 @ NC_000913 3656144.0 +1 "p10" " 0.9 bits" 0.901138 -1.824551 0.034034 @ NC_000913 3656122.0 +1 "p35" " 5.6 bits" 5.586696 0.831831 0.202752 define "p35-(22)-p10 3656144 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 3656122.0 1 "p35-(22)-p10 3656144 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 3656144 total 4.2" "-" "||" "||" -22 0 @ NC_000913 3656144 1 "p35-p10 3656144 total 4.2" "bits" 4.153309 0.000000 0.000000 @ NC_000913 3656197.0 +1 "p10" " 1.1 bits" 1.132633 -1.715769 0.043102 @ NC_000913 3656175.0 +1 "p35" " 5.5 bits" 5.536744 0.805235 0.210342 define "p35-(22)-p10 3656197 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 3656175.0 1 "p35-(22)-p10 3656197 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 3656197 total 4.3" "-" "||" "||" -22 0 @ NC_000913 3656197 1 "p35-p10 3656197 total 4.3" "bits" 4.334852 0.000000 0.000000 @ NC_000913 3656198.0 +1 "p10" " 0.7 bits" 0.673850 -1.931356 0.026720 @ NC_000913 3656175.0 +1 "p35" " 5.5 bits" 5.536744 0.805235 0.210342 define "p35-(23)-p10 3656198 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 3656175.0 1 "p35-(23)-p10 3656198 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 3656198 total 4.8" "-" "||" "||" -23 0 @ NC_000913 3656198 1 "p35-p10 3656198 total 4.8" "bits" 4.773310 0.000000 0.000000 @ NC_000913 3656286.0 +1 "p10" " 5.1 bits" 5.102881 0.149896 0.440423 @ NC_000913 3656263.0 +1 "p35" " 1.4 bits" 1.405190 -1.394563 0.081574 define "p35-(23)-p10 3656286 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 3656263.0 1 "p35-(23)-p10 3656286 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 3656286 total 5.1" "-" "||" "||" -23 0 @ NC_000913 3656286 1 "p35-p10 3656286 total 5.1" "bits" 5.070787 0.000000 0.000000 * petalfeatures: color rectangle features for the lister program * version = 2.16 of mkpetals 2007 Dec 07 * format: * el: integer; (* edgelinewidth: edge linewidth (integer) *) * c : char; (* color kind: how color is defined: r for RGB, h for HSB *) * (* ---------------------------------------------- *) * eh: real; (* edgeh: edge hue OR red *) * es: real; (* edges: edge saturation OR blue *) * eb: real; (* edgeb: edge brightness OR green *) * (* ---------------------------------------------- *) * fh: real; (* fillh: fill hue OR red *) * fs: real; (* fills: fill saturation OR blue *) * fb: real; (* fillb: fill brightness OR green *) * (* ---------------------------------------------- *) * spare: real; (* spare *) * "name" el c eh es eb fh fs fb spare * * Determine rgb for full saturation: * hsb is 0.000 1 1.0 * rgb is 1 0 0 petal "ir" -1 h 1.0 0.0 1.0 0.000 -1 1.0 0.0 * * Determine rgb for full saturation: * hsb is 0.250 1 1.0 * rgb is 0.499997914 1 0 petal "sd" -1 h 1.0 0.0 1.0 0.250 -1 1.0 0.0 * * Determine rgb for full saturation: * hsb is 0.500 1 1.0 * rgb is 0 1 1 petal "p10" -1 h 1.0 0.0 1.0 0.500 -1 1.0 0.0 * * Determine rgb for full saturation: * hsb is 0.750 1 1.0 * rgb is 0.499998093 0 1 petal "p35" -1 h 1.0 0.0 1.0 0.750 -1 1.0 0.0