define "NC_000913.ygaQ" "-" "<]" "[>" 0 332 @ NC_000913 2784419 1 "NC_000913.ygaQ" "" * orf 1.24 * 2007/12/07 18:39:42, 2007/12/06 18:15:19, small proteins E.coli-K12 NC_000913 ileY_ygaQ define "orf" "#" "<]" "[>" 0.0 2.0 * multiscan 3.94 define "ir" " w" " " " " -3.0 14.0 ribl "ir" * Ri 2.66 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.40; encoding of sequences in ** * 2001/08/15 12:20:50, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2001/08/15 12:20:50, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -3 14 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -3 14 frombase, tobase 0.763679 -0.567865 -0.078059 -0.559121 -3 1656 658 924 662 0.060296 0.121401 -0.896385 0.412266 -2 1017 1061 524 1298 0.115951 0.077219 -0.700990 0.315744 -1 1057 1029 600 1214 1.864201 -9.929808 -1.710640 -4.285952 0 3551 1 298 50 -9.930548 -9.930548 -9.930548 1.999450 1 0 0 0 3900 -9.930548 -9.930548 1.999450 -9.930548 2 0 0 3900 0 0.980085 -0.684256 -0.271597 -0.797951 3 1924 607 808 561 0.577986 0.185235 -0.610136 -0.486865 4 1456 1109 639 696 0.421131 -0.371388 -0.649038 0.320490 5 1306 754 622 1218 0.761063 -0.222449 -0.164937 -0.850324 6 1653 836 870 541 0.760190 -0.361852 -0.990229 0.033088 7 1652 759 491 998 0.327579 -0.404288 -0.227636 0.181327 8 1224 737 833 1106 0.511061 -0.074940 -0.356161 -0.246814 9 1390 926 762 822 0.320490 -0.232841 -1.013929 0.489098 10 1218 830 483 1369 0.361362 -0.236321 -0.539639 0.235099 11 1253 828 671 1148 0.516241 -0.161624 -0.127292 -0.398427 12 1395 872 893 740 0.262484 -0.145174 -1.056364 0.499598 13 1170 882 469 1379 0.129536 -0.173252 -0.456103 0.365961 14 1067 865 711 1257 * 6.721797 bits = mean (Rsequence of selected region) 2.259310 bits = standard deviation * 13.926145 bits = Ri of consensus sequence from -3 to 14 -40.078734 bits = Ri of anticonsensus sequence from -3 to 14 * -18.663794 bits = average Ri for random sequence from -3 to 14 * 3900 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * l extreme: char; h or l, the high or low extreme to be defined 0.0 wavelocation: real; the location in bases of the extreme 1.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . * multiscan 3.94 define "sd" " w" " " " " -12.0 4.0 ribl "sd" * Ri 2.66 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.40; encoding of sequences in ** * 2001/08/15 12:19:55, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2001/08/15 12:19:55, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -12 4 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -12 4 frombase, tobase 0.217397 -0.146810 -0.422014 0.246365 -12 1134 881 728 1157 0.214850 -0.225905 -0.493097 0.347479 -11 1132 834 693 1241 0.297808 -0.264472 -0.556943 0.329935 -10 1199 812 663 1226 0.335807 -0.201888 -0.667714 0.307402 -9 1231 848 614 1207 0.365961 -0.269813 -0.732592 0.354437 -8 1257 809 587 1247 0.390992 -0.260923 -0.644406 0.278426 -7 1279 814 624 1183 0.470004 -0.384844 -0.663022 0.282080 -6 1351 747 616 1186 0.534737 -0.443979 -0.628312 0.223744 -5 1413 717 631 1139 0.518308 -0.482725 -0.693794 0.301413 -4 1397 698 603 1202 0.728403 0.107739 0.058876 -2.168257 -3 1616 1051 1016 217 1.215487 -1.382914 -0.412139 -0.885414 -2 2265 374 733 528 -1.993170 -4.122453 1.824244 -2.749899 -1 245 56 3454 145 -9.930548 -9.930548 1.999450 -9.930548 0 0 0 3900 0 1.567045 -1.677143 -9.930548 -0.468329 1 2890 305 0 705 0.187835 -1.739984 0.884774 -0.486865 2 1111 292 1801 696 0.657969 -0.888149 -0.404288 0.169539 3 1539 527 737 1097 0.550982 -0.390650 -0.468329 0.067371 4 1429 744 705 1022 * 5.801573 bits = mean (Rsequence of selected region) 2.550546 bits = standard deviation * 12.967941 bits = Ri of consensus sequence from -12 to 4 -36.133077 bits = Ri of anticonsensus sequence from -12 to 4 * -13.026643 bits = average Ri for random sequence from -12 to 4 * 3900 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * l extreme: char; h or l, the high or low extreme to be defined 0.0 wavelocation: real; the location in bases of the extreme 1.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . @ NC_000913 2784403.0 -1 "ir" "ileY_ygaQ-" 6.518795 -0.089851 0.464203 @ NC_000913 2784394.0 -1 "orf" "4 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 2784412.0 -1 "sd" "" 2.194885 -1.414085 0.078669 define "sd-(9)-ir 2784403 Gap" "-" "}{" "}{" 0.0 -9.0 @ NC_000913 2784403.0 -1 "sd-(9)-ir 2784403 Gap" "2.3 bits" 2.279003 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 2784403 ileY_ygaQ- total 6.4" "-" "||" "||" 0.0 9.0 @ NC_000913 2784412.0 -1 "sd-ir 2784403 ileY_ygaQ- total 6.4" "bits" 6.434677 4.000000 2784394.000000 0.000000 -> [ir], [sd] @ NC_000913 2784390.0 -1 "ir" "ileY_ygaQ-" 6.941504 0.097245 0.461266 @ NC_000913 2784372.0 -1 "orf" "7 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 2784400.0 -1 "sd" "" 3.952216 -0.725083 0.234201 define "sd-(10)-ir 2784390 Gap" "-" "}{" "}{" 0.0 -10.0 @ NC_000913 2784390.0 -1 "sd-(10)-ir 2784390 Gap" "2.7 bits" 2.719960 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 2784390 ileY_ygaQ- total 8.2" "-" "||" "||" 0.0 10.0 @ NC_000913 2784400.0 -1 "sd-ir 2784390 ileY_ygaQ- total 8.2" "bits" 8.173760 7.000000 2784372.000000 0.000000 -> [ir], [sd] @ NC_000913 2784387.0 -1 "ir" "ileY_ygaQ-" 7.436450 0.316315 0.375882 @ NC_000913 2784372.0 -1 "orf" "6 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 2784397.0 -1 "sd" "" 2.852797 -1.156135 0.123813 define "sd-(10)-ir 2784387 Gap" "-" "}{" "}{" 0.0 -10.0 @ NC_000913 2784387.0 -1 "sd-(10)-ir 2784387 Gap" "2.7 bits" 2.719960 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 2784387 ileY_ygaQ- total 7.6" "-" "||" "||" 0.0 10.0 @ NC_000913 2784397.0 -1 "sd-ir 2784387 ileY_ygaQ- total 7.6" "bits" 7.569287 6.000000 2784372.000000 0.000000 -> [ir], [sd] @ NC_000913 2784367.0 -1 "ir" "ileY_ygaQ-" 5.426807 -0.573179 0.283262 @ NC_000913 2784223.0 -1 "orf" "49 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 2784378.0 -1 "sd" "" 6.363383 0.220270 0.412830 define "sd-(11)-ir 2784367 Gap" "-" "}{" "}{" 0.0 -11.0 @ NC_000913 2784367.0 -1 "sd-(11)-ir 2784367 Gap" "3.0 bits" 3.043105 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 2784367 ileY_ygaQ- total 8.7" "-" "||" "||" 0.0 11.0 @ NC_000913 2784378.0 -1 "sd-ir 2784367 ileY_ygaQ- total 8.7" "bits" 8.747085 49.000000 2784223.000000 1.000000 -> [ir], [sd] @ NC_000913 2784354.0 -1 "ir" "ileY_ygaQ-" 6.205471 -0.228533 0.409616 @ NC_000913 2784297.0 -1 "orf" "20 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 2784365.0 -1 "sd" "" 3.654371 -0.841860 0.199933 define "sd-(11)-ir 2784354 Gap" "-" "}{" "}{" 0.0 -11.0 @ NC_000913 2784354.0 -1 "sd-(11)-ir 2784354 Gap" "3.0 bits" 3.043105 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 2784354 ileY_ygaQ- total 6.8" "-" "||" "||" 0.0 11.0 @ NC_000913 2784365.0 -1 "sd-ir 2784354 ileY_ygaQ- total 6.8" "bits" 6.816737 20.000000 2784297.000000 1.000000 -> [ir], [sd] @ NC_000913 2784295.0 -1 "ir" "ileY_ygaQ-" 8.646909 0.852080 0.197085 @ NC_000913 2784223.0 -1 "orf" "25 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 2784305.0 -1 "sd" "" 9.479596 1.442053 0.074644 define "sd-(10)-ir 2784295 Gap" "-" "}{" "}{" 0.0 -10.0 @ NC_000913 2784295.0 -1 "sd-(10)-ir 2784295 Gap" "2.7 bits" 2.719960 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 2784295 ileY_ygaQ- total 15.4" "-" "||" "||" 0.0 10.0 @ NC_000913 2784305.0 -1 "sd-ir 2784295 ileY_ygaQ- total 15.4" "bits" 15.406545 25.000000 2784223.000000 1.000000 -> [ir], [sd] @ NC_000913 2784200.0 -1 "ir" "ileY_ygaQ-" 10.333734 1.598690 0.054945 @ NC_000913 2784152.0 -1 "orf" "17 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 2784211.0 -1 "sd" "" 2.906600 -1.135040 0.128179 define "sd-(11)-ir 2784200 Gap" "-" "}{" "}{" 0.0 -11.0 @ NC_000913 2784200.0 -1 "sd-(11)-ir 2784200 Gap" "3.0 bits" 3.043105 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 2784200 ileY_ygaQ- total 10.2" "-" "||" "||" 0.0 11.0 @ NC_000913 2784211.0 -1 "sd-ir 2784200 ileY_ygaQ- total 10.2" "bits" 10.197229 17.000000 2784152.000000 1.000000 -> [ir], [sd] @ NC_000913 2784165.0 -1 "ir" "ileY_ygaQ-" 5.871122 -0.376520 0.353265 @ NC_000913 2784159.0 -1 "orf" "3 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 2784175.0 -1 "sd" "" 1.960504 -1.505979 0.066036 define "sd-(10)-ir 2784165 Gap" "-" "}{" "}{" 0.0 -10.0 @ NC_000913 2784165.0 -1 "sd-(10)-ir 2784165 Gap" "2.7 bits" 2.719960 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 2784165 ileY_ygaQ- total 5.1" "-" "||" "||" 0.0 10.0 @ NC_000913 2784175.0 -1 "sd-ir 2784165 ileY_ygaQ- total 5.1" "bits" 5.111666 3.000000 2784159.000000 0.000000 -> [ir], [sd] @ NC_000913 2784138.0 -1 "ir" "ileY_ygaQ-" 7.471715 0.331923 0.369974 @ NC_000913 2784117.0 -1 "orf" "8 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 2784147.0 -1 "sd" "" 2.380155 -1.341445 0.089888 define "sd-(9)-ir 2784138 Gap" "-" "}{" "}{" 0.0 -9.0 @ NC_000913 2784138.0 -1 "sd-(9)-ir 2784138 Gap" "2.3 bits" 2.279003 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 2784138 ileY_ygaQ- total 7.6" "-" "||" "||" 0.0 9.0 @ NC_000913 2784147.0 -1 "sd-ir 2784138 ileY_ygaQ- total 7.6" "bits" 7.572867 8.000000 2784117.000000 0.000000 -> [ir], [sd] @ NC_000913 2784135.0 -1 "ir" "ileY_ygaQ-" 7.419383 0.308761 0.378752 @ NC_000913 2784117.0 -1 "orf" "7 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 2784147.0 -1 "sd" "" 2.380155 -1.341445 0.089888 define "sd-(12)-ir 2784135 Gap" "-" "}{" "}{" 0.0 -12.0 @ NC_000913 2784135.0 -1 "sd-(12)-ir 2784135 Gap" "4.0 bits" 3.966064 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 2784135 ileY_ygaQ- total 5.8" "-" "||" "||" 0.0 12.0 @ NC_000913 2784147.0 -1 "sd-ir 2784135 ileY_ygaQ- total 5.8" "bits" 5.833474 7.000000 2784117.000000 0.000000 -> [ir], [sd] @ NC_000913 2784060.0 -1 "ir" "ileY_ygaQ-" 8.081954 0.602023 0.273579 @ NC_000913 2784033.0 -1 "orf" "10 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 2784074.0 -1 "sd" "" 2.987338 -1.103385 0.134930 define "sd-(14)-ir 2784060 Gap" "-" "}{" "}{" 0.0 -14.0 @ NC_000913 2784060.0 -1 "sd-(14)-ir 2784060 Gap" "4.9 bits" 4.898425 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 2784060 ileY_ygaQ- total 6.2" "-" "||" "||" 0.0 14.0 @ NC_000913 2784074.0 -1 "sd-ir 2784060 ileY_ygaQ- total 6.2" "bits" 6.170867 10.000000 2784033.000000 1.000000 -> [ir], [sd] * * 1 sequences are in the genomebook * 11 ORFs are in the genomebook * multiscan 3.94 * 2007/12/07 18:39:42, 2007/12/06 18:15:19, small proteins E.coli-K12 NC_000913 ileY_ygaQ define "p10" " w" " " " " -1.0 4.0 ribl "p10" * Ri 2.69 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.41; encoding of sequences in ** * 2003/04/23 22:04:54, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2003/04/23 22:04:54, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -1 4 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -1 4 frombase, tobase -2.129296 -1.226594 -2.404931 1.650922 -1 23 43 19 316 1.890173 -6.660036 -5.067896 -2.009002 0 373 0 3 25 0.061387 -0.608464 -0.980433 0.830957 1 105 66 51 179 1.061387 -0.980433 -0.871499 -0.243467 2 210 51 55 85 1.061387 -0.052946 -1.443405 -0.819968 3 210 97 37 57 -6.660036 -2.404931 -3.193427 1.882417 4 0 19 11 371 * 4.783894 bits = mean (Rsequence of selected region) 2.128061 bits = standard deviation * 8.377244 bits = Ri of consensus sequence from -1 to 4 -19.129274 bits = Ri of anticonsensus sequence from -1 to 4 * -7.329533 bits = average Ri for random sequence from -1 to 4 * 401 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * l extreme: char; h or l, the high or low extreme to be defined 4.0 wavelocation: real; the location in bases of the extreme 1.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . * multiscan 3.94 * 2007/12/07 18:39:42, 2007/12/06 18:15:19, small proteins E.coli-K12 NC_000913 ileY_ygaQ define "p35" " w" " " " " -1.0 4.0 ribl "p35" * Ri 2.69 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.41; encoding of sequences in ** * 2003/04/23 22:05:06, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2003/04/23 22:05:06, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -1 4 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -1 4 frombase, tobase -1.260541 -6.660036 -6.660036 1.834982 -1 42 0 0 359 -2.482933 -6.660036 -0.482933 1.627912 0 18 0 72 311 -2.482933 -4.067896 1.277879 0.402424 1 18 6 244 133 0.781770 0.423957 -6.660036 -0.113700 2 173 135 0 93 0.496889 0.476425 -1.330930 -0.349078 3 142 140 40 79 0.413231 -1.009002 -0.482933 0.527051 4 134 50 72 145 * 4.024391 bits = mean (Rsequence of selected region) 1.878152 bits = standard deviation * 6.546482 bits = Ri of consensus sequence from -1 to 4 -26.387937 bits = Ri of anticonsensus sequence from -1 to 4 * -8.110127 bits = average Ri for random sequence from -1 to 4 * 401 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * h extreme: char; h or l, the high or low extreme to be defined -1.0 wavelocation: real; the location in bases of the extreme 2.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . @ NC_000913 2784420.0 -1 "p10" " 5.5 bits" 5.499727 0.336378 0.368293 @ NC_000913 2784446.0 -1 "p35" " 3.5 bits" 3.457264 -0.301960 0.381341 define "p35-(26)-p10 2784420 Gap" "-" "}{" "}{" 0.0 -26 @ NC_000913 2784420.0 -1 "p35-(26)-p10 2784420 Gap" "3.7 bits" 3.702256 1.428290 4.003602 define "p35-p10 2784420 total 5.3" "-" "||" "||" 0 26 @ NC_000913 2784446 -1 "p35-p10 2784420 total 5.3" "bits" 5.254735 0.000000 0.000000 @ NC_000913 2784363.0 -1 "p10" " 4.5 bits" 4.478068 -0.143711 0.442864 @ NC_000913 2784386.0 -1 "p35" " 2.6 bits" 2.555490 -0.782099 0.217078 define "p35-(23)-p10 2784363 Gap" "-" "}{" "}{" 0.0 -23 @ NC_000913 2784363.0 -1 "p35-(23)-p10 2784363 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 2784363 total 5.6" "-" "||" "||" 0 23 @ NC_000913 2784386 -1 "p35-p10 2784363 total 5.6" "bits" 5.596274 0.000000 0.000000 @ NC_000913 2784317.0 -1 "p10" " 3.4 bits" 3.425303 -0.638417 0.261601 @ NC_000913 2784343.0 -1 "p35" " 6.1 bits" 6.074850 1.091743 0.137473 define "p35-(26)-p10 2784317 Gap" "-" "}{" "}{" 0.0 -26 @ NC_000913 2784317.0 -1 "p35-(26)-p10 2784317 Gap" "3.7 bits" 3.702256 1.428290 4.003602 define "p35-p10 2784317 total 5.8" "-" "||" "||" 0 26 @ NC_000913 2784343 -1 "p35-p10 2784317 total 5.8" "bits" 5.797897 0.000000 0.000000 @ NC_000913 2784301.0 -1 "p10" " 0.9 bits" 0.852749 -1.847290 0.032353 @ NC_000913 2784324.0 -1 "p35" " 4.8 bits" 4.775558 0.399950 0.344597 define "p35-(23)-p10 2784301 Gap" "-" "}{" "}{" 0.0 -23 @ NC_000913 2784301.0 -1 "p35-(23)-p10 2784301 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 2784301 total 4.2" "-" "||" "||" 0 23 @ NC_000913 2784324 -1 "p35-p10 2784301 total 4.2" "bits" 4.191023 0.000000 0.000000 @ NC_000913 2784298.0 -1 "p10" " 4.3 bits" 4.321390 -0.217336 0.413973 @ NC_000913 2784324.0 -1 "p35" " 4.8 bits" 4.775558 0.399950 0.344597 define "p35-(26)-p10 2784298 Gap" "-" "}{" "}{" 0.0 -26 @ NC_000913 2784298.0 -1 "p35-(26)-p10 2784298 Gap" "3.7 bits" 3.702256 1.428290 4.003602 define "p35-p10 2784298 total 5.4" "-" "||" "||" 0 26 @ NC_000913 2784324 -1 "p35-p10 2784298 total 5.4" "bits" 5.394692 0.000000 0.000000 @ NC_000913 2784290.0 -1 "p10" " 3.7 bits" 3.708498 -0.505341 0.306660 @ NC_000913 2784312.0 -1 "p35" " 4.7 bits" 4.711241 0.365705 0.357293 define "p35-(22)-p10 2784290 Gap" "-" "}{" "}{" 0.0 -22 @ NC_000913 2784290.0 -1 "p35-(22)-p10 2784290 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 2784290 total 6.1" "-" "||" "||" 0 22 @ NC_000913 2784312 -1 "p35-p10 2784290 total 6.1" "bits" 6.085214 0.000000 0.000000 @ NC_000913 2784289.0 -1 "p10" " 1.4 bits" 1.438970 -1.571818 0.057996 @ NC_000913 2784312.0 -1 "p35" " 4.7 bits" 4.711241 0.365705 0.357293 define "p35-(23)-p10 2784289 Gap" "-" "}{" "}{" 0.0 -23 @ NC_000913 2784289.0 -1 "p35-(23)-p10 2784289 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 2784289 total 4.7" "-" "||" "||" 0 23 @ NC_000913 2784312 -1 "p35-p10 2784289 total 4.7" "bits" 4.712927 0.000000 0.000000 @ NC_000913 2784242.0 -1 "p10" " 3.8 bits" 3.827455 -0.449442 0.326557 @ NC_000913 2784263.0 -1 "p35" " 3.5 bits" 3.519704 -0.268715 0.394075 define "p35-(21)-p10 2784242 Gap" "-" "}{" "}{" 0.0 -21 @ NC_000913 2784242.0 -1 "p35-(21)-p10 2784242 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 2784242 total 4.0" "-" "||" "||" 0 21 @ NC_000913 2784263 -1 "p35-p10 2784242 total 4.0" "bits" 4.048258 0.000000 0.000000 @ NC_000913 2784144.0 -1 "p10" " 6.3 bits" 6.335423 0.729081 0.232976 @ NC_000913 2784167.0 -1 "p35" " 3.8 bits" 3.815077 -0.111447 0.455631 define "p35-(23)-p10 2784144 Gap" "-" "}{" "}{" 0.0 -23 @ NC_000913 2784144.0 -1 "p35-(23)-p10 2784144 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 2784144 total 8.7" "-" "||" "||" 0 23 @ NC_000913 2784167 -1 "p35-p10 2784144 total 8.7" "bits" 8.713216 0.000000 0.000000 @ NC_000913 2784141.0 -1 "p10" " 5.5 bits" 5.499727 0.336378 0.368293 @ NC_000913 2784163.0 -1 "p35" " 2.6 bits" 2.607819 -0.754237 0.225353 define "p35-(22)-p10 2784141 Gap" "-" "}{" "}{" 0.0 -22 @ NC_000913 2784141.0 -1 "p35-(22)-p10 2784141 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 2784141 total 5.8" "-" "||" "||" 0 22 @ NC_000913 2784163 -1 "p35-p10 2784141 total 5.8" "bits" 5.773021 0.000000 0.000000 @ NC_000913 2784088.0 -1 "p10" " 4.7 bits" 4.730157 -0.025252 0.489927 @ NC_000913 2784113.0 -1 "p35" " 3.6 bits" 3.560183 -0.247162 0.402391 define "p35-(25)-p10 2784088 Gap" "-" "}{" "}{" 0.0 -25 @ NC_000913 2784088.0 -1 "p35-(25)-p10 2784088 Gap" "4.0 bits" 4.012597 1.428290 4.003602 define "p35-p10 2784088 total 4.3" "-" "||" "||" 0 25 @ NC_000913 2784113 -1 "p35-p10 2784088 total 4.3" "bits" 4.277743 0.000000 0.000000 @ NC_000913 2784072.0 -1 "p10" " 6.3 bits" 6.335423 0.729081 0.232976 @ NC_000913 2784094.0 -1 "p35" " 1.5 bits" 1.475851 -1.356940 0.087400 define "p35-(22)-p10 2784072 Gap" "-" "}{" "}{" 0.0 -22 @ NC_000913 2784072.0 -1 "p35-(22)-p10 2784072 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 2784072 total 5.5" "-" "||" "||" 0 22 @ NC_000913 2784094 -1 "p35-p10 2784072 total 5.5" "bits" 5.476749 0.000000 0.000000 @ NC_000913 2783977.0 -1 "p10" " 3.2 bits" 3.173214 -0.756877 0.224562 @ NC_000913 2784000.0 -1 "p35" " 4.2 bits" 4.247031 0.118542 0.452819 define "p35-(23)-p10 2783977 Gap" "-" "}{" "}{" 0.0 -23 @ NC_000913 2783977.0 -1 "p35-(23)-p10 2783977 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 2783977 total 6.0" "-" "||" "||" 0 23 @ NC_000913 2784000 -1 "p35-p10 2783977 total 6.0" "bits" 5.982961 0.000000 0.000000 @ NC_000913 2783898.0 -1 "p10" " 2.6 bits" 2.596713 -1.027781 0.152026 @ NC_000913 2783920.0 -1 "p35" " 5.5 bits" 5.536744 0.805235 0.210342 define "p35-(22)-p10 2783898 Gap" "-" "}{" "}{" 0.0 -22 @ NC_000913 2783898.0 -1 "p35-(22)-p10 2783898 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 2783898 total 5.8" "-" "||" "||" 0 22 @ NC_000913 2783920 -1 "p35-p10 2783898 total 5.8" "bits" 5.798932 0.000000 0.000000 @ NC_000913 2783878.0 -1 "p10" " 4.6 bits" 4.567597 -0.101640 0.459521 @ NC_000913 2783901.0 -1 "p35" " 1.7 bits" 1.709523 -1.232524 0.108877 define "p35-(23)-p10 2783878 Gap" "-" "}{" "}{" 0.0 -23 @ NC_000913 2783878.0 -1 "p35-(23)-p10 2783878 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 2783878 total 4.8" "-" "||" "||" 0 23 @ NC_000913 2783901 -1 "p35-p10 2783878 total 4.8" "bits" 4.839836 0.000000 0.000000 * petalfeatures: color rectangle features for the lister program * version = 2.16 of mkpetals 2007 Dec 07 * format: * el: integer; (* edgelinewidth: edge linewidth (integer) *) * c : char; (* color kind: how color is defined: r for RGB, h for HSB *) * (* ---------------------------------------------- *) * eh: real; (* edgeh: edge hue OR red *) * es: real; (* edges: edge saturation OR blue *) * eb: real; (* edgeb: edge brightness OR green *) * (* ---------------------------------------------- *) * fh: real; (* fillh: fill hue OR red *) * fs: real; (* fills: fill saturation OR blue *) * fb: real; (* fillb: fill brightness OR green *) * (* ---------------------------------------------- *) * spare: real; (* spare *) * "name" el c eh es eb fh fs fb spare * * Determine rgb for full saturation: * hsb is 0.000 1 1.0 * rgb is 1 0 0 petal "ir" -1 h 1.0 0.0 1.0 0.000 -1 1.0 0.0 * * Determine rgb for full saturation: * hsb is 0.250 1 1.0 * rgb is 0.499997914 1 0 petal "sd" -1 h 1.0 0.0 1.0 0.250 -1 1.0 0.0 * * Determine rgb for full saturation: * hsb is 0.500 1 1.0 * rgb is 0 1 1 petal "p10" -1 h 1.0 0.0 1.0 0.500 -1 1.0 0.0 * * Determine rgb for full saturation: * hsb is 0.750 1 1.0 * rgb is 0.499998093 0 1 petal "p35" -1 h 1.0 0.0 1.0 0.750 -1 1.0 0.0