define "NC_000913.yjiC" "-" "<]" "[>" 0 830 @ NC_000913 4554343 -1 "NC_000913.yjiC" "" define "NC_000913.yjiD" "-" "<]" "[>" 0 392 @ NC_000913 4555016 1 "NC_000913.yjiD" "" * orf 1.24 * 2007/12/07 18:42:35, 2007/12/06 18:15:19, small proteins E.coli-K12 NC_000913 yjiC_yjiD define "orf" "#" "<]" "[>" 0.0 2.0 * multiscan 3.94 define "ir" " w" " " " " -3.0 14.0 ribl "ir" * Ri 2.66 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.40; encoding of sequences in ** * 2001/08/15 12:20:50, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2001/08/15 12:20:50, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -3 14 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -3 14 frombase, tobase 0.763679 -0.567865 -0.078059 -0.559121 -3 1656 658 924 662 0.060296 0.121401 -0.896385 0.412266 -2 1017 1061 524 1298 0.115951 0.077219 -0.700990 0.315744 -1 1057 1029 600 1214 1.864201 -9.929808 -1.710640 -4.285952 0 3551 1 298 50 -9.930548 -9.930548 -9.930548 1.999450 1 0 0 0 3900 -9.930548 -9.930548 1.999450 -9.930548 2 0 0 3900 0 0.980085 -0.684256 -0.271597 -0.797951 3 1924 607 808 561 0.577986 0.185235 -0.610136 -0.486865 4 1456 1109 639 696 0.421131 -0.371388 -0.649038 0.320490 5 1306 754 622 1218 0.761063 -0.222449 -0.164937 -0.850324 6 1653 836 870 541 0.760190 -0.361852 -0.990229 0.033088 7 1652 759 491 998 0.327579 -0.404288 -0.227636 0.181327 8 1224 737 833 1106 0.511061 -0.074940 -0.356161 -0.246814 9 1390 926 762 822 0.320490 -0.232841 -1.013929 0.489098 10 1218 830 483 1369 0.361362 -0.236321 -0.539639 0.235099 11 1253 828 671 1148 0.516241 -0.161624 -0.127292 -0.398427 12 1395 872 893 740 0.262484 -0.145174 -1.056364 0.499598 13 1170 882 469 1379 0.129536 -0.173252 -0.456103 0.365961 14 1067 865 711 1257 * 6.721797 bits = mean (Rsequence of selected region) 2.259310 bits = standard deviation * 13.926145 bits = Ri of consensus sequence from -3 to 14 -40.078734 bits = Ri of anticonsensus sequence from -3 to 14 * -18.663794 bits = average Ri for random sequence from -3 to 14 * 3900 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * l extreme: char; h or l, the high or low extreme to be defined 0.0 wavelocation: real; the location in bases of the extreme 1.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . * multiscan 3.94 define "sd" " w" " " " " -12.0 4.0 ribl "sd" * Ri 2.66 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.40; encoding of sequences in ** * 2001/08/15 12:19:55, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2001/08/15 12:19:55, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -12 4 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -12 4 frombase, tobase 0.217397 -0.146810 -0.422014 0.246365 -12 1134 881 728 1157 0.214850 -0.225905 -0.493097 0.347479 -11 1132 834 693 1241 0.297808 -0.264472 -0.556943 0.329935 -10 1199 812 663 1226 0.335807 -0.201888 -0.667714 0.307402 -9 1231 848 614 1207 0.365961 -0.269813 -0.732592 0.354437 -8 1257 809 587 1247 0.390992 -0.260923 -0.644406 0.278426 -7 1279 814 624 1183 0.470004 -0.384844 -0.663022 0.282080 -6 1351 747 616 1186 0.534737 -0.443979 -0.628312 0.223744 -5 1413 717 631 1139 0.518308 -0.482725 -0.693794 0.301413 -4 1397 698 603 1202 0.728403 0.107739 0.058876 -2.168257 -3 1616 1051 1016 217 1.215487 -1.382914 -0.412139 -0.885414 -2 2265 374 733 528 -1.993170 -4.122453 1.824244 -2.749899 -1 245 56 3454 145 -9.930548 -9.930548 1.999450 -9.930548 0 0 0 3900 0 1.567045 -1.677143 -9.930548 -0.468329 1 2890 305 0 705 0.187835 -1.739984 0.884774 -0.486865 2 1111 292 1801 696 0.657969 -0.888149 -0.404288 0.169539 3 1539 527 737 1097 0.550982 -0.390650 -0.468329 0.067371 4 1429 744 705 1022 * 5.801573 bits = mean (Rsequence of selected region) 2.550546 bits = standard deviation * 12.967941 bits = Ri of consensus sequence from -12 to 4 -36.133077 bits = Ri of anticonsensus sequence from -12 to 4 * -13.026643 bits = average Ri for random sequence from -12 to 4 * 3900 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * l extreme: char; h or l, the high or low extreme to be defined 0.0 wavelocation: real; the location in bases of the extreme 1.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . @ NC_000913 4554358.0 +1 "ir" "yjiC_yjiD+" 7.461485 0.327396 0.371684 @ NC_000913 4554445.0 +1 "orf" "30 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 4554348.0 +1 "sd" "" 0.673458 -2.010595 0.022184 define "sd-(10)-ir 4554358 Gap" "-" "{}" "{}" 0.0 10.0 @ NC_000913 4554348.0 +1 "sd-(10)-ir 4554358 Gap" "2.7 bits" 2.719960 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 4554358 yjiC_yjiD+ total 5.4" "-" "||" "||" -10.0 0.0 @ NC_000913 4554358.0 +1 "sd-ir 4554358 yjiC_yjiD+ total 5.4" "bits" 5.414983 30.000000 4554445.000000 1.000000 -> [ir], [sd] @ NC_000913 4554424.0 +1 "ir" "yjiC_yjiD+" 5.740745 -0.434226 0.332062 @ NC_000913 4554445.0 +1 "orf" "8 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 4554411.0 +1 "sd" "" 6.618748 0.320392 0.374336 define "sd-(13)-ir 4554424 Gap" "-" "{}" "{}" 0.0 13.0 @ NC_000913 4554411.0 +1 "sd-(13)-ir 4554424 Gap" "4.6 bits" 4.637227 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 4554424 yjiC_yjiD+ total 7.7" "-" "||" "||" -13.0 0.0 @ NC_000913 4554424.0 +1 "sd-ir 4554424 yjiC_yjiD+ total 7.7" "bits" 7.722266 8.000000 4554445.000000 0.000000 -> [ir], [sd] @ NC_000913 4554429.0 +1 "ir" "yjiC_yjiD+" 6.679966 -0.018515 0.492614 @ NC_000913 4554480.0 +1 "orf" "18 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 4554411.0 +1 "sd" "" 6.618748 0.320392 0.374336 define "sd-(18)-ir 4554429 Gap" "-" "{}" "{}" 0.0 18.0 @ NC_000913 4554411.0 +1 "sd-(18)-ir 4554429 Gap" "6.9 bits" 6.931848 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 4554429 yjiC_yjiD+ total 6.4" "-" "||" "||" -18.0 0.0 @ NC_000913 4554429.0 +1 "sd-ir 4554429 yjiC_yjiD+ total 6.4" "bits" 6.366866 18.000000 4554480.000000 1.000000 -> [ir], [sd] @ NC_000913 4554597.0 +1 "ir" "yjiC_yjiD+" 6.865936 0.063798 0.474566 @ NC_000913 4554696.0 +1 "orf" "34 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 4554584.0 +1 "sd" "" 5.046011 -0.296235 0.383525 define "sd-(13)-ir 4554597 Gap" "-" "{}" "{}" 0.0 13.0 @ NC_000913 4554584.0 +1 "sd-(13)-ir 4554597 Gap" "4.6 bits" 4.637227 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 4554597 yjiC_yjiD+ total 7.3" "-" "||" "||" -13.0 0.0 @ NC_000913 4554597.0 +1 "sd-ir 4554597 yjiC_yjiD+ total 7.3" "bits" 7.274720 34.000000 4554696.000000 1.000000 -> [ir], [sd] @ NC_000913 4554630.0 +1 "ir" "yjiC_yjiD+" 5.878076 -0.373442 0.354410 @ NC_000913 4554696.0 +1 "orf" "23 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 4554621.0 +1 "sd" "" 1.671061 -1.619462 0.052674 define "sd-(9)-ir 4554630 Gap" "-" "{}" "{}" 0.0 9.0 @ NC_000913 4554621.0 +1 "sd-(9)-ir 4554630 Gap" "2.3 bits" 2.279003 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 4554630 yjiC_yjiD+ total 5.3" "-" "||" "||" -9.0 0.0 @ NC_000913 4554630.0 +1 "sd-ir 4554630 yjiC_yjiD+ total 5.3" "bits" 5.270134 23.000000 4554696.000000 1.000000 -> [ir], [sd] @ NC_000913 4554687.0 +1 "ir" "yjiC_yjiD+" 8.840605 0.937812 0.174171 @ NC_000913 4554696.0 +1 "orf" "4 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 4554680.0 +1 "sd" "" 3.777871 -0.793439 0.213761 define "sd-(7)-ir 4554687 Gap" "-" "{}" "{}" 0.0 7.0 @ NC_000913 4554680.0 +1 "sd-(7)-ir 4554687 Gap" "3.7 bits" 3.703029 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 4554687 yjiC_yjiD+ total 8.9" "-" "||" "||" -7.0 0.0 @ NC_000913 4554687.0 +1 "sd-ir 4554687 yjiC_yjiD+ total 8.9" "bits" 8.915447 4.000000 4554696.000000 0.000000 -> [ir], [sd] @ NC_000913 4554916.0 +1 "ir" "yjiC_yjiD+" 8.570995 0.818479 0.206542 @ NC_000913 4554910.0 +1 "sd" "" 3.654453 -0.841828 0.199942 define "sd-(6)-ir 4554916 Gap" "-" "{}" "{}" 0.0 6.0 @ NC_000913 4554910.0 +1 "sd-(6)-ir 4554916 Gap" "4.3 bits" 4.339391 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 4554916 yjiC_yjiD+ total 7.9" "-" "||" "||" -6.0 0.0 @ NC_000913 4554916.0 +1 "sd-ir 4554916 yjiC_yjiD+ total 7.9" "bits" 7.886057 0.000000 0.000000 0.000000 -> [ir], [sd] @ NC_000913 4554930.0 +1 "ir" "yjiC_yjiD+" 7.275628 0.245133 0.403177 @ NC_000913 4555017.0 +1 "orf" "30 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 4554918.0 +1 "sd" "" 1.954996 -1.508139 0.065760 define "sd-(12)-ir 4554930 Gap" "-" "{}" "{}" 0.0 12.0 @ NC_000913 4554918.0 +1 "sd-(12)-ir 4554930 Gap" "4.0 bits" 3.966064 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 4554930 yjiC_yjiD+ total 5.3" "-" "||" "||" -12.0 0.0 @ NC_000913 4554930.0 +1 "sd-ir 4554930 yjiC_yjiD+ total 5.3" "bits" 5.264560 30.000000 4555017.000000 1.000000 -> [ir], [sd] @ NC_000913 4554936.0 +1 "ir" "yjiC_yjiD+" 8.543798 0.806441 0.209994 @ NC_000913 4555017.0 +1 "orf" "28 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 4554928.0 +1 "sd" "" 7.567875 0.692519 0.244306 define "sd-(8)-ir 4554936 Gap" "-" "{}" "{}" 0.0 8.0 @ NC_000913 4554928.0 +1 "sd-(8)-ir 4554936 Gap" "2.4 bits" 2.446019 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 4554936 yjiC_yjiD+ total 13.7" "-" "||" "||" -8.0 0.0 @ NC_000913 4554936.0 +1 "sd-ir 4554936 yjiC_yjiD+ total 13.7" "bits" 13.665654 28.000000 4555017.000000 1.000000 -> [ir], [sd] @ NC_000913 4554943.0 +1 "ir" "yjiC_yjiD+" 8.758704 0.901562 0.183645 @ NC_000913 4554928.0 +1 "sd" "" 7.567875 0.692519 0.244306 define "sd-(15)-ir 4554943 Gap" "-" "{}" "{}" 0.0 15.0 @ NC_000913 4554928.0 +1 "sd-(15)-ir 4554943 Gap" "6.0 bits" 6.001111 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 4554943 yjiC_yjiD+ total 10.3" "-" "||" "||" -15.0 0.0 @ NC_000913 4554943.0 +1 "sd-ir 4554943 yjiC_yjiD+ total 10.3" "bits" 10.325468 0.000000 0.000000 0.000000 -> [ir], [sd] @ NC_000913 4555016.0 +1 "ir" "yjiC_yjiD+" 5.954957 -0.339413 0.367149 @ NC_000913 4555005.0 +1 "sd" "" 7.362982 0.612186 0.270207 define "sd-(11)-ir 4555016 Gap" "-" "{}" "{}" 0.0 11.0 @ NC_000913 4555005.0 +1 "sd-(11)-ir 4555016 Gap" "3.0 bits" 3.043105 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 4555016 yjiC_yjiD+ total 10.3" "-" "||" "||" -11.0 0.0 @ NC_000913 4555016.0 +1 "sd-ir 4555016 yjiC_yjiD+ total 10.3" "bits" 10.274834 0.000000 0.000000 0.000000 -> [ir], [sd] @ NC_000913 4555019.0 +1 "ir" "yjiC_yjiD+" 6.915757 0.085849 0.465793 @ NC_000913 4555005.0 +1 "sd" "" 7.362982 0.612186 0.270207 define "sd-(14)-ir 4555019 Gap" "-" "{}" "{}" 0.0 14.0 @ NC_000913 4555005.0 +1 "sd-(14)-ir 4555019 Gap" "4.9 bits" 4.898425 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 4555019 yjiC_yjiD+ total 9.4" "-" "||" "||" -14.0 0.0 @ NC_000913 4555019.0 +1 "sd-ir 4555019 yjiC_yjiD+ total 9.4" "bits" 9.380314 0.000000 0.000000 0.000000 -> [ir], [sd] * * 1 sequences are in the genomebook * 8 ORFs are in the genomebook * multiscan 3.94 * 2007/12/07 18:42:35, 2007/12/06 18:15:19, small proteins E.coli-K12 NC_000913 yjiC_yjiD define "p10" " w" " " " " -1.0 4.0 ribl "p10" * Ri 2.69 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.41; encoding of sequences in ** * 2003/04/23 22:04:54, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2003/04/23 22:04:54, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -1 4 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -1 4 frombase, tobase -2.129296 -1.226594 -2.404931 1.650922 -1 23 43 19 316 1.890173 -6.660036 -5.067896 -2.009002 0 373 0 3 25 0.061387 -0.608464 -0.980433 0.830957 1 105 66 51 179 1.061387 -0.980433 -0.871499 -0.243467 2 210 51 55 85 1.061387 -0.052946 -1.443405 -0.819968 3 210 97 37 57 -6.660036 -2.404931 -3.193427 1.882417 4 0 19 11 371 * 4.783894 bits = mean (Rsequence of selected region) 2.128061 bits = standard deviation * 8.377244 bits = Ri of consensus sequence from -1 to 4 -19.129274 bits = Ri of anticonsensus sequence from -1 to 4 * -7.329533 bits = average Ri for random sequence from -1 to 4 * 401 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * l extreme: char; h or l, the high or low extreme to be defined 4.0 wavelocation: real; the location in bases of the extreme 1.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . * multiscan 3.94 * 2007/12/07 18:42:35, 2007/12/06 18:15:19, small proteins E.coli-K12 NC_000913 yjiC_yjiD define "p35" " w" " " " " -1.0 4.0 ribl "p35" * Ri 2.69 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.41; encoding of sequences in ** * 2003/04/23 22:05:06, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2003/04/23 22:05:06, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -1 4 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -1 4 frombase, tobase -1.260541 -6.660036 -6.660036 1.834982 -1 42 0 0 359 -2.482933 -6.660036 -0.482933 1.627912 0 18 0 72 311 -2.482933 -4.067896 1.277879 0.402424 1 18 6 244 133 0.781770 0.423957 -6.660036 -0.113700 2 173 135 0 93 0.496889 0.476425 -1.330930 -0.349078 3 142 140 40 79 0.413231 -1.009002 -0.482933 0.527051 4 134 50 72 145 * 4.024391 bits = mean (Rsequence of selected region) 1.878152 bits = standard deviation * 6.546482 bits = Ri of consensus sequence from -1 to 4 -26.387937 bits = Ri of anticonsensus sequence from -1 to 4 * -8.110127 bits = average Ri for random sequence from -1 to 4 * 401 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * h extreme: char; h or l, the high or low extreme to be defined -1.0 wavelocation: real; the location in bases of the extreme 2.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . @ NC_000913 4554351.0 +1 "p10" " 3.0 bits" 3.014647 -0.831389 0.202877 @ NC_000913 4554325.0 +1 "p35" " 5.3 bits" 5.342703 0.701920 0.241365 define "p35-(26)-p10 4554351 Gap" "-" "{}" "{}" 0.0 26 @ NC_000913 4554325.0 1 "p35-(26)-p10 4554351 Gap" "3.7 bits" 3.702256 1.428290 4.003602 define "p35-p10 4554351 total 4.7" "-" "||" "||" -26 0 @ NC_000913 4554351 1 "p35-p10 4554351 total 4.7" "bits" 4.655094 0.000000 0.000000 @ NC_000913 4554355.0 +1 "p10" " 3.2 bits" 3.173214 -0.756877 0.224562 @ NC_000913 4554333.0 +1 "p35" " 4.1 bits" 4.077825 0.028450 0.488652 define "p35-(22)-p10 4554355 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 4554333.0 1 "p35-(22)-p10 4554355 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 4554355 total 4.9" "-" "||" "||" -22 0 @ NC_000913 4554355 1 "p35-p10 4554355 total 4.9" "bits" 4.916514 0.000000 0.000000 @ NC_000913 4554382.0 +1 "p10" " 3.8 bits" 3.827455 -0.449442 0.326557 @ NC_000913 4554359.0 +1 "p35" " 1.6 bits" 1.623141 -1.278517 0.100534 define "p35-(23)-p10 4554382 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 4554359.0 1 "p35-(23)-p10 4554382 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 4554382 total 4.0" "-" "||" "||" -23 0 @ NC_000913 4554382 1 "p35-p10 4554382 total 4.0" "bits" 4.013312 0.000000 0.000000 @ NC_000913 4554391.0 +1 "p10" " 5.7 bits" 5.726318 0.442856 0.328935 @ NC_000913 4554366.0 +1 "p35" " 3.8 bits" 3.777162 -0.131634 0.447637 define "p35-(25)-p10 4554391 Gap" "-" "{}" "{}" 0.0 25 @ NC_000913 4554366.0 1 "p35-(25)-p10 4554391 Gap" "4.0 bits" 4.012597 1.428290 4.003602 define "p35-p10 4554391 total 5.5" "-" "||" "||" -25 0 @ NC_000913 4554391 1 "p35-p10 4554391 total 5.5" "bits" 5.490883 0.000000 0.000000 @ NC_000913 4554493.0 +1 "p10" " 5.1 bits" 5.102881 0.149896 0.440423 @ NC_000913 4554472.0 +1 "p35" " 2.5 bits" 2.461685 -0.832044 0.202692 define "p35-(21)-p10 4554493 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 4554472.0 1 "p35-(21)-p10 4554493 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 4554493 total 4.3" "-" "||" "||" -21 0 @ NC_000913 4554493 1 "p35-p10 4554493 total 4.3" "bits" 4.265665 0.000000 0.000000 @ NC_000913 4554537.0 +1 "p10" " 2.5 bits" 2.531829 -1.058271 0.144966 @ NC_000913 4554514.0 +1 "p35" " 5.6 bits" 5.557208 0.816130 0.207213 define "p35-(23)-p10 4554537 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 4554514.0 1 "p35-(23)-p10 4554537 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 4554537 total 6.7" "-" "||" "||" -23 0 @ NC_000913 4554537 1 "p35-p10 4554537 total 6.7" "bits" 6.651753 0.000000 0.000000 @ NC_000913 4554550.0 +1 "p10" " 2.8 bits" 2.785041 -0.939284 0.173793 @ NC_000913 4554525.0 +1 "p35" " 6.2 bits" 6.188670 1.152345 0.124590 define "p35-(25)-p10 4554550 Gap" "-" "{}" "{}" 0.0 25 @ NC_000913 4554525.0 1 "p35-(25)-p10 4554550 Gap" "4.0 bits" 4.012597 1.428290 4.003602 define "p35-p10 4554550 total 5.0" "-" "||" "||" -25 0 @ NC_000913 4554550 1 "p35-p10 4554550 total 5.0" "bits" 4.961114 0.000000 0.000000 @ NC_000913 4554576.0 +1 "p10" " 6.5 bits" 6.495888 0.804485 0.210558 @ NC_000913 4554552.0 +1 "p35" " 1.5 bits" 1.468071 -1.361083 0.086744 define "p35-(24)-p10 4554576 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 4554552.0 1 "p35-(24)-p10 4554576 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 4554576 total 5.5" "-" "||" "||" -24 0 @ NC_000913 4554576 1 "p35-p10 4554576 total 5.5" "bits" 5.536325 0.000000 0.000000 @ NC_000913 4554588.0 +1 "p10" " 6.5 bits" 6.495888 0.804485 0.210558 @ NC_000913 4554566.0 +1 "p35" " 4.7 bits" 4.690532 0.354679 0.361415 define "p35-(22)-p10 4554588 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 4554566.0 1 "p35-(22)-p10 4554588 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 4554588 total 8.9" "-" "||" "||" -22 0 @ NC_000913 4554588 1 "p35-p10 4554588 total 8.9" "bits" 8.851895 0.000000 0.000000 @ NC_000913 4554594.0 +1 "p10" " 4.6 bits" 4.597025 -0.087812 0.465013 @ NC_000913 4554572.0 +1 "p35" " 5.2 bits" 5.228883 0.641318 0.260658 define "p35-(22)-p10 4554594 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 4554572.0 1 "p35-(22)-p10 4554594 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 4554594 total 7.5" "-" "||" "||" -22 0 @ NC_000913 4554594 1 "p35-p10 4554594 total 7.5" "bits" 7.491383 0.000000 0.000000 @ NC_000913 4554612.0 +1 "p10" " 5.2 bits" 5.191034 0.191320 0.424138 @ NC_000913 4554591.0 +1 "p35" " 2.6 bits" 2.575505 -0.771442 0.220222 define "p35-(21)-p10 4554612 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 4554591.0 1 "p35-(21)-p10 4554612 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 4554612 total 4.5" "-" "||" "||" -21 0 @ NC_000913 4554612 1 "p35-p10 4554612 total 4.5" "bits" 4.467638 0.000000 0.000000 @ NC_000913 4554630.0 +1 "p10" " 4.6 bits" 4.563002 -0.103800 0.458664 @ NC_000913 4554609.0 +1 "p35" " 3.5 bits" 3.540168 -0.257819 0.398273 define "p35-(21)-p10 4554630 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 4554609.0 1 "p35-(21)-p10 4554630 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 4554630 total 4.8" "-" "||" "||" -21 0 @ NC_000913 4554630 1 "p35-p10 4554630 total 4.8" "bits" 4.804269 0.000000 0.000000 @ NC_000913 4554643.0 +1 "p10" " 6.5 bits" 6.495888 0.804485 0.210558 @ NC_000913 4554620.0 +1 "p35" " 2.6 bits" 2.555490 -0.782099 0.217078 define "p35-(23)-p10 4554643 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 4554620.0 1 "p35-(23)-p10 4554643 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 4554643 total 7.6" "-" "||" "||" -23 0 @ NC_000913 4554643 1 "p35-p10 4554643 total 7.6" "bits" 7.614094 0.000000 0.000000 @ NC_000913 4554645.0 +1 "p10" " 7.1 bits" 7.072389 1.075390 0.141100 @ NC_000913 4554621.0 +1 "p35" " 2.7 bits" 2.714216 -0.697587 0.242718 define "p35-(24)-p10 4554645 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 4554621.0 1 "p35-(24)-p10 4554645 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 4554645 total 7.4" "-" "||" "||" -24 0 @ NC_000913 4554645 1 "p35-p10 4554645 total 7.4" "bits" 7.358971 0.000000 0.000000 @ NC_000913 4554670.0 +1 "p10" " 4.6 bits" 4.597025 -0.087812 0.465013 @ NC_000913 4554647.0 +1 "p35" " 1.0 bits" 1.044234 -1.586750 0.056285 define "p35-(23)-p10 4554670 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 4554647.0 1 "p35-(23)-p10 4554670 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 4554670 total 4.2" "-" "||" "||" -23 0 @ NC_000913 4554670 1 "p35-p10 4554670 total 4.2" "bits" 4.203975 0.000000 0.000000 @ NC_000913 4554672.0 +1 "p10" " 2.0 bits" 2.015471 -1.300913 0.096644 @ NC_000913 4554650.0 +1 "p35" " 5.5 bits" 5.536744 0.805235 0.210342 define "p35-(22)-p10 4554672 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 4554650.0 1 "p35-(22)-p10 4554672 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 4554672 total 5.2" "-" "||" "||" -22 0 @ NC_000913 4554672 1 "p35-p10 4554672 total 5.2" "bits" 5.217690 0.000000 0.000000 @ NC_000913 4554684.0 +1 "p10" " 3.0 bits" 3.016536 -0.830502 0.203128 @ NC_000913 4554662.0 +1 "p35" " 4.8 bits" 4.805046 0.415651 0.338833 define "p35-(22)-p10 4554684 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 4554662.0 1 "p35-(22)-p10 4554684 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 4554684 total 5.5" "-" "||" "||" -22 0 @ NC_000913 4554684 1 "p35-p10 4554684 total 5.5" "bits" 5.487057 0.000000 0.000000 @ NC_000913 4554701.0 +1 "p10" " 4.4 bits" 4.421464 -0.170310 0.432383 @ NC_000913 4554679.0 +1 "p35" " 2.2 bits" 2.221874 -0.959729 0.168596 define "p35-(22)-p10 4554701 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 4554679.0 1 "p35-(22)-p10 4554701 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 4554701 total 4.3" "-" "||" "||" -22 0 @ NC_000913 4554701 1 "p35-p10 4554701 total 4.3" "bits" 4.308813 0.000000 0.000000 @ NC_000913 4554738.0 +1 "p10" " 5.2 bits" 5.191034 0.191320 0.424138 @ NC_000913 4554716.0 +1 "p35" " 1.6 bits" 1.565521 -1.309196 0.095234 define "p35-(22)-p10 4554738 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 4554716.0 1 "p35-(22)-p10 4554738 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 4554738 total 4.4" "-" "||" "||" -22 0 @ NC_000913 4554738 1 "p35-p10 4554738 total 4.4" "bits" 4.422030 0.000000 0.000000 @ NC_000913 4554762.0 +1 "p10" " 2.2 bits" 2.246966 -1.192131 0.116605 @ NC_000913 4554740.0 +1 "p35" " 4.6 bits" 4.641274 0.328452 0.371285 define "p35-(22)-p10 4554762 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 4554740.0 1 "p35-(22)-p10 4554762 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 4554762 total 4.6" "-" "||" "||" -22 0 @ NC_000913 4554762 1 "p35-p10 4554762 total 4.6" "bits" 4.553715 0.000000 0.000000 @ NC_000913 4554763.0 +1 "p10" " 2.7 bits" 2.715670 -0.971882 0.165555 @ NC_000913 4554740.0 +1 "p35" " 4.6 bits" 4.641274 0.328452 0.371285 define "p35-(23)-p10 4554763 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 4554740.0 1 "p35-(23)-p10 4554763 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 4554763 total 5.9" "-" "||" "||" -23 0 @ NC_000913 4554763 1 "p35-p10 4554763 total 5.9" "bits" 5.919660 0.000000 0.000000 @ NC_000913 4554814.0 +1 "p10" " 2.6 bits" 2.555205 -1.047286 0.147484 @ NC_000913 4554792.0 +1 "p35" " 4.7 bits" 4.718664 0.369658 0.355819 define "p35-(22)-p10 4554814 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 4554792.0 1 "p35-(22)-p10 4554814 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 4554814 total 4.9" "-" "||" "||" -22 0 @ NC_000913 4554814 1 "p35-p10 4554814 total 4.9" "bits" 4.939344 0.000000 0.000000 @ NC_000913 4554868.0 +1 "p10" " 7.3 bits" 7.262910 1.164918 0.122026 @ NC_000913 4554847.0 +1 "p35" " 2.2 bits" 2.217692 -0.961956 0.168036 define "p35-(21)-p10 4554868 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 4554847.0 1 "p35-(21)-p10 4554868 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 4554868 total 6.2" "-" "||" "||" -21 0 @ NC_000913 4554868 1 "p35-p10 4554868 total 6.2" "bits" 6.181701 0.000000 0.000000 @ NC_000913 4554870.0 +1 "p10" " 3.8 bits" 3.751613 -0.485081 0.313810 @ NC_000913 4554847.0 +1 "p35" " 2.2 bits" 2.217692 -0.961956 0.168036 define "p35-(23)-p10 4554870 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 4554847.0 1 "p35-(23)-p10 4554870 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 4554870 total 4.5" "-" "||" "||" -23 0 @ NC_000913 4554870 1 "p35-p10 4554870 total 4.5" "bits" 4.532021 0.000000 0.000000 @ NC_000913 4554940.0 +1 "p10" " 3.6 bits" 3.551820 -0.578966 0.281306 @ NC_000913 4554917.0 +1 "p35" " 1.9 bits" 1.914907 -1.123170 0.130683 define "p35-(23)-p10 4554940 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 4554917.0 1 "p35-(23)-p10 4554940 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 4554940 total 4.0" "-" "||" "||" -23 0 @ NC_000913 4554940 1 "p35-p10 4554940 total 4.0" "bits" 4.029443 0.000000 0.000000 @ NC_000913 4554955.0 +1 "p10" " 4.4 bits" 4.433030 -0.164875 0.434521 @ NC_000913 4554932.0 +1 "p35" " 3.1 bits" 3.118038 -0.482577 0.314698 define "p35-(23)-p10 4554955 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 4554932.0 1 "p35-(23)-p10 4554955 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 4554955 total 6.1" "-" "||" "||" -23 0 @ NC_000913 4554955 1 "p35-p10 4554955 total 6.1" "bits" 6.113784 0.000000 0.000000 @ NC_000913 4555013.0 +1 "p10" " 4.7 bits" 4.730157 -0.025252 0.489927 @ NC_000913 4554992.0 +1 "p35" " 5.2 bits" 5.228883 0.641318 0.260658 define "p35-(21)-p10 4555013 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 4554992.0 1 "p35-(21)-p10 4555013 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 4555013 total 6.7" "-" "||" "||" -21 0 @ NC_000913 4555013 1 "p35-p10 4555013 total 6.7" "bits" 6.660139 0.000000 0.000000 @ NC_000913 4555016.0 +1 "p10" " 2.7 bits" 2.664139 -0.996097 0.159602 @ NC_000913 4554992.0 +1 "p35" " 5.2 bits" 5.228883 0.641318 0.260658 define "p35-(24)-p10 4555016 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 4554992.0 1 "p35-(24)-p10 4555016 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 4555016 total 5.5" "-" "||" "||" -24 0 @ NC_000913 4555016 1 "p35-p10 4555016 total 5.5" "bits" 5.465388 0.000000 0.000000 * petalfeatures: color rectangle features for the lister program * version = 2.16 of mkpetals 2007 Dec 07 * format: * el: integer; (* edgelinewidth: edge linewidth (integer) *) * c : char; (* color kind: how color is defined: r for RGB, h for HSB *) * (* ---------------------------------------------- *) * eh: real; (* edgeh: edge hue OR red *) * es: real; (* edges: edge saturation OR blue *) * eb: real; (* edgeb: edge brightness OR green *) * (* ---------------------------------------------- *) * fh: real; (* fillh: fill hue OR red *) * fs: real; (* fills: fill saturation OR blue *) * fb: real; (* fillb: fill brightness OR green *) * (* ---------------------------------------------- *) * spare: real; (* spare *) * "name" el c eh es eb fh fs fb spare * * Determine rgb for full saturation: * hsb is 0.000 1 1.0 * rgb is 1 0 0 petal "ir" -1 h 1.0 0.0 1.0 0.000 -1 1.0 0.0 * * Determine rgb for full saturation: * hsb is 0.250 1 1.0 * rgb is 0.499997914 1 0 petal "sd" -1 h 1.0 0.0 1.0 0.250 -1 1.0 0.0 * * Determine rgb for full saturation: * hsb is 0.500 1 1.0 * rgb is 0 1 1 petal "p10" -1 h 1.0 0.0 1.0 0.500 -1 1.0 0.0 * * Determine rgb for full saturation: * hsb is 0.750 1 1.0 * rgb is 0.499998093 0 1 petal "p35" -1 h 1.0 0.0 1.0 0.750 -1 1.0 0.0