define "NC_000913.yncH" "-" "<]" "[>" 0 212 @ NC_000913 1524964 1 "NC_000913.yncH" "" define "NC_000913.rhsE" "-" "<]" "[>" 0 2048 @ NC_000913 1525914 1 "NC_000913.rhsE" "" * orf 1.24 * 2007/12/07 19:45:45, 2007/12/06 18:15:19, small proteins E.coli-K12 NC_000913 yncH_rhsE define "orf" "#" "<]" "[>" 0.0 2.0 * multiscan 3.94 define "ir" " w" " " " " -3.0 14.0 ribl "ir" * Ri 2.66 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.40; encoding of sequences in ** * 2001/08/15 12:20:50, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2001/08/15 12:20:50, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -3 14 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -3 14 frombase, tobase 0.763679 -0.567865 -0.078059 -0.559121 -3 1656 658 924 662 0.060296 0.121401 -0.896385 0.412266 -2 1017 1061 524 1298 0.115951 0.077219 -0.700990 0.315744 -1 1057 1029 600 1214 1.864201 -9.929808 -1.710640 -4.285952 0 3551 1 298 50 -9.930548 -9.930548 -9.930548 1.999450 1 0 0 0 3900 -9.930548 -9.930548 1.999450 -9.930548 2 0 0 3900 0 0.980085 -0.684256 -0.271597 -0.797951 3 1924 607 808 561 0.577986 0.185235 -0.610136 -0.486865 4 1456 1109 639 696 0.421131 -0.371388 -0.649038 0.320490 5 1306 754 622 1218 0.761063 -0.222449 -0.164937 -0.850324 6 1653 836 870 541 0.760190 -0.361852 -0.990229 0.033088 7 1652 759 491 998 0.327579 -0.404288 -0.227636 0.181327 8 1224 737 833 1106 0.511061 -0.074940 -0.356161 -0.246814 9 1390 926 762 822 0.320490 -0.232841 -1.013929 0.489098 10 1218 830 483 1369 0.361362 -0.236321 -0.539639 0.235099 11 1253 828 671 1148 0.516241 -0.161624 -0.127292 -0.398427 12 1395 872 893 740 0.262484 -0.145174 -1.056364 0.499598 13 1170 882 469 1379 0.129536 -0.173252 -0.456103 0.365961 14 1067 865 711 1257 * 6.721797 bits = mean (Rsequence of selected region) 2.259310 bits = standard deviation * 13.926145 bits = Ri of consensus sequence from -3 to 14 -40.078734 bits = Ri of anticonsensus sequence from -3 to 14 * -18.663794 bits = average Ri for random sequence from -3 to 14 * 3900 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * l extreme: char; h or l, the high or low extreme to be defined 0.0 wavelocation: real; the location in bases of the extreme 1.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . * multiscan 3.94 define "sd" " w" " " " " -12.0 4.0 ribl "sd" * Ri 2.66 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.40; encoding of sequences in ** * 2001/08/15 12:19:55, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2001/08/15 12:19:55, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -12 4 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -12 4 frombase, tobase 0.217397 -0.146810 -0.422014 0.246365 -12 1134 881 728 1157 0.214850 -0.225905 -0.493097 0.347479 -11 1132 834 693 1241 0.297808 -0.264472 -0.556943 0.329935 -10 1199 812 663 1226 0.335807 -0.201888 -0.667714 0.307402 -9 1231 848 614 1207 0.365961 -0.269813 -0.732592 0.354437 -8 1257 809 587 1247 0.390992 -0.260923 -0.644406 0.278426 -7 1279 814 624 1183 0.470004 -0.384844 -0.663022 0.282080 -6 1351 747 616 1186 0.534737 -0.443979 -0.628312 0.223744 -5 1413 717 631 1139 0.518308 -0.482725 -0.693794 0.301413 -4 1397 698 603 1202 0.728403 0.107739 0.058876 -2.168257 -3 1616 1051 1016 217 1.215487 -1.382914 -0.412139 -0.885414 -2 2265 374 733 528 -1.993170 -4.122453 1.824244 -2.749899 -1 245 56 3454 145 -9.930548 -9.930548 1.999450 -9.930548 0 0 0 3900 0 1.567045 -1.677143 -9.930548 -0.468329 1 2890 305 0 705 0.187835 -1.739984 0.884774 -0.486865 2 1111 292 1801 696 0.657969 -0.888149 -0.404288 0.169539 3 1539 527 737 1097 0.550982 -0.390650 -0.468329 0.067371 4 1429 744 705 1022 * 5.801573 bits = mean (Rsequence of selected region) 2.550546 bits = standard deviation * 12.967941 bits = Ri of consensus sequence from -12 to 4 -36.133077 bits = Ri of anticonsensus sequence from -12 to 4 * -13.026643 bits = average Ri for random sequence from -12 to 4 * 3900 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * l extreme: char; h or l, the high or low extreme to be defined 0.0 wavelocation: real; the location in bases of the extreme 1.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . @ NC_000913 1525185.0 +1 "ir" "yncH_rhsE+" 3.780589 -1.301817 0.096489 @ NC_000913 1525218.0 +1 "orf" "12 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 1525180.0 +1 "sd" "" 8.929000 1.226179 0.110066 define "sd-(5)-ir 1525185 Gap" "-" "{}" "{}" 0.0 5.0 @ NC_000913 1525180.0 +1 "sd-(5)-ir 1525185 Gap" "5.4 bits" 5.408286 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 1525185 yncH_rhsE+ total 7.3" "-" "||" "||" -5.0 0.0 @ NC_000913 1525185.0 +1 "sd-ir 1525185 yncH_rhsE+ total 7.3" "bits" 7.301303 12.000000 1525218.000000 1.000000 -> [ir], [sd] @ NC_000913 1525228.0 +1 "ir" "yncH_rhsE+" 6.289098 -0.191518 0.424060 @ NC_000913 1525252.0 +1 "orf" "9 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 1525221.0 +1 "sd" "" 4.766013 -0.406015 0.342366 define "sd-(7)-ir 1525228 Gap" "-" "{}" "{}" 0.0 7.0 @ NC_000913 1525221.0 +1 "sd-(7)-ir 1525228 Gap" "3.7 bits" 3.703029 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 1525228 yncH_rhsE+ total 7.4" "-" "||" "||" -7.0 0.0 @ NC_000913 1525228.0 +1 "sd-ir 1525228 yncH_rhsE+ total 7.4" "bits" 7.352082 9.000000 1525252.000000 0.000000 -> [ir], [sd] @ NC_000913 1525240.0 +1 "ir" "yncH_rhsE+" 5.270204 -0.642494 0.260276 @ NC_000913 1525252.0 +1 "orf" "5 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 1525231.0 +1 "sd" "" 7.238639 0.563435 0.286569 define "sd-(9)-ir 1525240 Gap" "-" "{}" "{}" 0.0 9.0 @ NC_000913 1525231.0 +1 "sd-(9)-ir 1525240 Gap" "2.3 bits" 2.279003 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 1525240 yncH_rhsE+ total 10.2" "-" "||" "||" -9.0 0.0 @ NC_000913 1525240.0 +1 "sd-ir 1525240 yncH_rhsE+ total 10.2" "bits" 10.229840 5.000000 1525252.000000 0.000000 -> [ir], [sd] @ NC_000913 1525296.0 +1 "ir" "yncH_rhsE+" 8.096612 0.608511 0.271424 @ NC_000913 1525308.0 +1 "orf" "5 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 1525292.0 +1 "sd" "" 6.279839 0.187515 0.425628 define "sd-(4)-ir 1525296 Gap" "-" "{}" "{}" 0.0 4.0 @ NC_000913 1525292.0 +1 "sd-(4)-ir 1525296 Gap" "9.3 bits" 9.346885 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 1525296 yncH_rhsE+ total 5.0" "-" "||" "||" -4.0 0.0 @ NC_000913 1525296.0 +1 "sd-ir 1525296 yncH_rhsE+ total 5.0" "bits" 5.029566 5.000000 1525308.000000 0.000000 -> [ir], [sd] @ NC_000913 1525300.0 +1 "ir" "yncH_rhsE+" 3.275304 -1.525463 0.063572 @ NC_000913 1525315.0 +1 "orf" "6 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 1525292.0 +1 "sd" "" 6.279839 0.187515 0.425628 define "sd-(8)-ir 1525300 Gap" "-" "{}" "{}" 0.0 8.0 @ NC_000913 1525292.0 +1 "sd-(8)-ir 1525300 Gap" "2.4 bits" 2.446019 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 1525300 yncH_rhsE+ total 7.1" "-" "||" "||" -8.0 0.0 @ NC_000913 1525300.0 +1 "sd-ir 1525300 yncH_rhsE+ total 7.1" "bits" 7.109124 6.000000 1525315.000000 0.000000 -> [ir], [sd] @ NC_000913 1525311.0 +1 "ir" "yncH_rhsE+" 6.315794 -0.179702 0.428693 @ NC_000913 1525332.0 +1 "orf" "8 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 1525299.0 +1 "sd" "" 6.319729 0.203155 0.419507 define "sd-(12)-ir 1525311 Gap" "-" "{}" "{}" 0.0 12.0 @ NC_000913 1525299.0 +1 "sd-(12)-ir 1525311 Gap" "4.0 bits" 3.966064 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 1525311 yncH_rhsE+ total 8.7" "-" "||" "||" -12.0 0.0 @ NC_000913 1525311.0 +1 "sd-ir 1525311 yncH_rhsE+ total 8.7" "bits" 8.669459 8.000000 1525332.000000 0.000000 -> [ir], [sd] @ NC_000913 1525402.0 +1 "ir" "yncH_rhsE+" 8.047478 0.586764 0.278681 @ NC_000913 1525531.0 +1 "orf" "44 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 1525397.0 +1 "sd" "" 3.676839 -0.833051 0.202408 define "sd-(5)-ir 1525402 Gap" "-" "{}" "{}" 0.0 5.0 @ NC_000913 1525397.0 +1 "sd-(5)-ir 1525402 Gap" "5.4 bits" 5.408286 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 1525402 yncH_rhsE+ total 6.3" "-" "||" "||" -5.0 0.0 @ NC_000913 1525402.0 +1 "sd-ir 1525402 yncH_rhsE+ total 6.3" "bits" 6.316031 44.000000 1525531.000000 1.000000 -> [ir], [sd] @ NC_000913 1525711.0 +1 "ir" "yncH_rhsE+" 8.718906 0.883946 0.188363 @ NC_000913 1525780.0 +1 "orf" "24 codons" R 1.000000 0.000000 0.000000 1.000000 @ NC_000913 1525705.0 +1 "sd" "" 4.010138 -0.702373 0.241223 define "sd-(6)-ir 1525711 Gap" "-" "{}" "{}" 0.0 6.0 @ NC_000913 1525705.0 +1 "sd-(6)-ir 1525711 Gap" "4.3 bits" 4.339391 2.276413 9.344296 0.000000 -> [ir], [sd] define "sd-ir 1525711 yncH_rhsE+ total 8.4" "-" "||" "||" -6.0 0.0 @ NC_000913 1525711.0 +1 "sd-ir 1525711 yncH_rhsE+ total 8.4" "bits" 8.389653 24.000000 1525780.000000 1.000000 -> [ir], [sd] * * 1 sequences are in the genomebook * 8 ORFs are in the genomebook * multiscan 3.94 * 2007/12/07 19:45:45, 2007/12/06 18:15:19, small proteins E.coli-K12 NC_000913 yncH_rhsE define "p10" " w" " " " " -1.0 4.0 ribl "p10" * Ri 2.69 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.41; encoding of sequences in ** * 2003/04/23 22:04:54, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2003/04/23 22:04:54, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -1 4 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -1 4 frombase, tobase -2.129296 -1.226594 -2.404931 1.650922 -1 23 43 19 316 1.890173 -6.660036 -5.067896 -2.009002 0 373 0 3 25 0.061387 -0.608464 -0.980433 0.830957 1 105 66 51 179 1.061387 -0.980433 -0.871499 -0.243467 2 210 51 55 85 1.061387 -0.052946 -1.443405 -0.819968 3 210 97 37 57 -6.660036 -2.404931 -3.193427 1.882417 4 0 19 11 371 * 4.783894 bits = mean (Rsequence of selected region) 2.128061 bits = standard deviation * 8.377244 bits = Ri of consensus sequence from -1 to 4 -19.129274 bits = Ri of anticonsensus sequence from -1 to 4 * -7.329533 bits = average Ri for random sequence from -1 to 4 * 401 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * l extreme: char; h or l, the high or low extreme to be defined 4.0 wavelocation: real; the location in bases of the extreme 1.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . * multiscan 3.94 * 2007/12/07 19:45:45, 2007/12/06 18:15:19, small proteins E.coli-K12 NC_000913 yncH_rhsE define "p35" " w" " " " " -1.0 4.0 ribl "p35" * Ri 2.69 * * Ri(b,l) table is from: ** rseq 5.39 rsequence calculated from encoded sequences from: ** encode 1.41; encoding of sequences in ** * 2003/04/23 22:05:06, 1999/05/04 14:41:13, inst * * BOOK/INST sequences are from: * 2003/04/23 22:05:06, 1999/05/04 14:41:13, inst * title "inst"; * * PARAMETERS FOR Ri: * -1 4 from-to * 1 column of value file * -2147483647.000000 2147483647.000000 lowest to highest Ri selected * -2147483647.000000 2147483647.000000 lowest to highest Value selected * not printing sequences to sequ * printing sequences to rixyin * -: whole line printed when partial site * using Staden's Method: when f(b,l) = 0, replace with f(b,l) = 1/(n+t), t = 2 * * i alignmenttype first, book, instructions * Ri(a,l) Ri(c,l) Ri(g,l) Ri(t,l) l a c g t -1 4 frombase, tobase -1.260541 -6.660036 -6.660036 1.834982 -1 42 0 0 359 -2.482933 -6.660036 -0.482933 1.627912 0 18 0 72 311 -2.482933 -4.067896 1.277879 0.402424 1 18 6 244 133 0.781770 0.423957 -6.660036 -0.113700 2 173 135 0 93 0.496889 0.476425 -1.330930 -0.349078 3 142 140 40 79 0.413231 -1.009002 -0.482933 0.527051 4 134 50 72 145 * 4.024391 bits = mean (Rsequence of selected region) 1.878152 bits = standard deviation * 6.546482 bits = Ri of consensus sequence from -1 to 4 -26.387937 bits = Ri of anticonsensus sequence from -1 to 4 * -8.110127 bits = average Ri for random sequence from -1 to 4 * 401 n, number of sequences used to create the matrix * asymmetric symmetry of the matrix * -5000.000000 Ri bound: lower bound on Ri 100.000000 Z bound: lower bound on Z 1.000000 P bound: upper probability * h extreme: char; h or l, the high or low extreme to be defined -1.0 wavelocation: real; the location in bases of the extreme 2.0 wavebit: real; the location in bits of the extreme 0.5 waveamplitude: real; the amplitude of the wave in bits 10.6 wavelength: real; the wave length of the wave in bases 0.4 0.4 0.0 dashon, dashoff, dashoffset (in bases) 0.0 thickness: real; the thickness of the cosine wave. <=0 means default . @ NC_000913 1525210.0 +1 "p10" " 3.3 bits" 3.292171 -0.700978 0.241659 @ NC_000913 1525187.0 +1 "p35" " 2.3 bits" 2.250006 -0.944750 0.172393 define "p35-(23)-p10 1525210 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 1525187.0 1 "p35-(23)-p10 1525210 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 1525210 total 4.1" "-" "||" "||" -23 0 @ NC_000913 1525210 1 "p35-p10 1525210 total 4.1" "bits" 4.104893 0.000000 0.000000 @ NC_000913 1525225.0 +1 "p10" " 2.5 bits" 2.522601 -1.062607 0.143980 @ NC_000913 1525201.0 +1 "p35" " 4.8 bits" 4.825061 0.426307 0.334942 define "p35-(24)-p10 1525225 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 1525201.0 1 "p35-(24)-p10 1525225 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 1525225 total 4.9" "-" "||" "||" -24 0 @ NC_000913 1525225 1 "p35-p10 1525225 total 4.9" "bits" 4.920028 0.000000 0.000000 @ NC_000913 1525253.0 +1 "p10" " 3.3 bits" 3.320325 -0.687748 0.245806 @ NC_000913 1525230.0 +1 "p35" " 2.5 bits" 2.493999 -0.814839 0.207582 define "p35-(23)-p10 1525253 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 1525230.0 1 "p35-(23)-p10 1525253 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 1525253 total 4.4" "-" "||" "||" -23 0 @ NC_000913 1525253 1 "p35-p10 1525253 total 4.4" "bits" 4.377040 0.000000 0.000000 @ NC_000913 1525304.0 +1 "p10" " 5.2 bits" 5.191034 0.191320 0.424138 @ NC_000913 1525280.0 +1 "p35" " 5.7 bits" 5.700516 0.892433 0.186080 define "p35-(24)-p10 1525304 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 1525280.0 1 "p35-(24)-p10 1525304 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 1525304 total 8.5" "-" "||" "||" -24 0 @ NC_000913 1525304 1 "p35-p10 1525304 total 8.5" "bits" 8.463916 0.000000 0.000000 @ NC_000913 1525308.0 +1 "p10" " 3.7 bits" 3.708498 -0.505341 0.306660 @ NC_000913 1525284.0 +1 "p35" " 4.8 bits" 4.825061 0.426307 0.334942 define "p35-(24)-p10 1525308 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 1525284.0 1 "p35-(24)-p10 1525308 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 1525308 total 6.1" "-" "||" "||" -24 0 @ NC_000913 1525308 1 "p35-p10 1525308 total 6.1" "bits" 6.105925 0.000000 0.000000 @ NC_000913 1525323.0 +1 "p10" " 6.3 bits" 6.302819 0.713760 0.237688 @ NC_000913 1525301.0 +1 "p35" " 2.6 bits" 2.555490 -0.782099 0.217078 define "p35-(22)-p10 1525323 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 1525301.0 1 "p35-(22)-p10 1525323 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 1525323 total 6.5" "-" "||" "||" -22 0 @ NC_000913 1525323 1 "p35-p10 1525323 total 6.5" "bits" 6.523784 0.000000 0.000000 @ NC_000913 1525326.0 +1 "p10" " 4.1 bits" 4.089895 -0.326118 0.372168 @ NC_000913 1525302.0 +1 "p35" " 2.7 bits" 2.714216 -0.697587 0.242718 define "p35-(24)-p10 1525326 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 1525302.0 1 "p35-(24)-p10 1525326 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 1525326 total 4.4" "-" "||" "||" -24 0 @ NC_000913 1525326 1 "p35-p10 1525326 total 4.4" "bits" 4.376477 0.000000 0.000000 @ NC_000913 1525328.0 +1 "p10" " 4.5 bits" 4.451520 -0.156186 0.437943 @ NC_000913 1525306.0 +1 "p35" " 4.7 bits" 4.661738 0.339348 0.367174 define "p35-(22)-p10 1525328 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 1525306.0 1 "p35-(22)-p10 1525328 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 1525328 total 6.8" "-" "||" "||" -22 0 @ NC_000913 1525328 1 "p35-p10 1525328 total 6.8" "bits" 6.778733 0.000000 0.000000 @ NC_000913 1525340.0 +1 "p10" " 4.7 bits" 4.684498 -0.046707 0.481373 @ NC_000913 1525315.0 +1 "p35" " 5.7 bits" 5.700516 0.892433 0.186080 define "p35-(25)-p10 1525340 Gap" "-" "{}" "{}" 0.0 25 @ NC_000913 1525315.0 1 "p35-(25)-p10 1525340 Gap" "4.0 bits" 4.012597 1.428290 4.003602 define "p35-p10 1525340 total 6.4" "-" "||" "||" -25 0 @ NC_000913 1525340 1 "p35-p10 1525340 total 6.4" "bits" 6.372417 0.000000 0.000000 @ NC_000913 1525363.0 +1 "p10" " 4.2 bits" 4.194873 -0.276788 0.390972 @ NC_000913 1525340.0 +1 "p35" " 1.6 bits" 1.589671 -1.296338 0.097430 define "p35-(23)-p10 1525363 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 1525340.0 1 "p35-(23)-p10 1525363 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 1525363 total 4.3" "-" "||" "||" -23 0 @ NC_000913 1525363 1 "p35-p10 1525363 total 4.3" "bits" 4.347260 0.000000 0.000000 @ NC_000913 1525496.0 +1 "p10" " 5.2 bits" 5.191034 0.191320 0.424138 @ NC_000913 1525472.0 +1 "p35" " 2.0 bits" 1.983651 -1.086568 0.138614 define "p35-(24)-p10 1525496 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 1525472.0 1 "p35-(24)-p10 1525496 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 1525496 total 4.7" "-" "||" "||" -24 0 @ NC_000913 1525496 1 "p35-p10 1525496 total 4.7" "bits" 4.747051 0.000000 0.000000 @ NC_000913 1525516.0 +1 "p10" " 7.1 bits" 7.072389 1.075390 0.141100 @ NC_000913 1525490.0 +1 "p35" " 3.2 bits" 3.202370 -0.437675 0.330811 define "p35-(26)-p10 1525516 Gap" "-" "{}" "{}" 0.0 26 @ NC_000913 1525490.0 1 "p35-(26)-p10 1525516 Gap" "3.7 bits" 3.702256 1.428290 4.003602 define "p35-p10 1525516 total 6.6" "-" "||" "||" -26 0 @ NC_000913 1525516 1 "p35-p10 1525516 total 6.6" "bits" 6.572503 0.000000 0.000000 @ NC_000913 1525519.0 +1 "p10" " 6.5 bits" 6.495888 0.804485 0.210558 @ NC_000913 1525498.0 +1 "p35" " 4.8 bits" 4.755094 0.389054 0.348618 define "p35-(21)-p10 1525519 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 1525498.0 1 "p35-(21)-p10 1525519 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 1525519 total 8.0" "-" "||" "||" -21 0 @ NC_000913 1525519 1 "p35-p10 1525519 total 8.0" "bits" 7.952081 0.000000 0.000000 @ NC_000913 1525536.0 +1 "p10" " 4.5 bits" 4.478068 -0.143711 0.442864 @ NC_000913 1525511.0 +1 "p35" " 5.3 bits" 5.342703 0.701920 0.241365 define "p35-(25)-p10 1525536 Gap" "-" "{}" "{}" 0.0 25 @ NC_000913 1525511.0 1 "p35-(25)-p10 1525536 Gap" "4.0 bits" 4.012597 1.428290 4.003602 define "p35-p10 1525536 total 5.8" "-" "||" "||" -25 0 @ NC_000913 1525536 1 "p35-p10 1525536 total 5.8" "bits" 5.808174 0.000000 0.000000 @ NC_000913 1525541.0 +1 "p10" " 5.7 bits" 5.726318 0.442856 0.328935 @ NC_000913 1525518.0 +1 "p35" " 1.9 bits" 1.890201 -1.136324 0.127910 define "p35-(23)-p10 1525541 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 1525518.0 1 "p35-(23)-p10 1525541 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 1525541 total 6.2" "-" "||" "||" -23 0 @ NC_000913 1525541 1 "p35-p10 1525541 total 6.2" "bits" 6.179235 0.000000 0.000000 @ NC_000913 1525574.0 +1 "p10" " 2.8 bits" 2.756207 -0.952833 0.170337 @ NC_000913 1525553.0 +1 "p35" " 6.4 bits" 6.432663 1.282256 0.099876 define "p35-(21)-p10 1525574 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 1525553.0 1 "p35-(21)-p10 1525574 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 1525574 total 5.9" "-" "||" "||" -21 0 @ NC_000913 1525574 1 "p35-p10 1525574 total 5.9" "bits" 5.889969 0.000000 0.000000 @ NC_000913 1525590.0 +1 "p10" " 5.7 bits" 5.674787 0.418641 0.337739 @ NC_000913 1525567.0 +1 "p35" " 1.6 bits" 1.565521 -1.309196 0.095234 define "p35-(23)-p10 1525590 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 1525567.0 1 "p35-(23)-p10 1525590 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 1525590 total 5.8" "-" "||" "||" -23 0 @ NC_000913 1525590 1 "p35-p10 1525590 total 5.8" "bits" 5.803024 0.000000 0.000000 @ NC_000913 1525636.0 +1 "p10" " 6.5 bits" 6.495888 0.804485 0.210558 @ NC_000913 1525612.0 +1 "p35" " 2.7 bits" 2.664713 -0.723945 0.234550 define "p35-(24)-p10 1525636 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 1525612.0 1 "p35-(24)-p10 1525636 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 1525636 total 6.7" "-" "||" "||" -24 0 @ NC_000913 1525636 1 "p35-p10 1525636 total 6.7" "bits" 6.732967 0.000000 0.000000 @ NC_000913 1525681.0 +1 "p10" " 3.3 bits" 3.292171 -0.700978 0.241659 @ NC_000913 1525658.0 +1 "p35" " 2.2 bits" 2.217692 -0.961956 0.168036 define "p35-(23)-p10 1525681 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 1525658.0 1 "p35-(23)-p10 1525681 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 1525681 total 4.1" "-" "||" "||" -23 0 @ NC_000913 1525681 1 "p35-p10 1525681 total 4.1" "bits" 4.072579 0.000000 0.000000 @ NC_000913 1525686.0 +1 "p10" " 2.6 bits" 2.596713 -1.027781 0.152026 @ NC_000913 1525663.0 +1 "p35" " 5.2 bits" 5.199395 0.625617 0.265783 define "p35-(23)-p10 1525686 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 1525663.0 1 "p35-(23)-p10 1525686 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 1525686 total 6.4" "-" "||" "||" -23 0 @ NC_000913 1525686 1 "p35-p10 1525686 total 6.4" "bits" 6.358824 0.000000 0.000000 @ NC_000913 1525688.0 +1 "p10" " 4.6 bits" 4.567597 -0.101640 0.459521 @ NC_000913 1525663.0 +1 "p35" " 5.2 bits" 5.199395 0.625617 0.265783 define "p35-(25)-p10 1525688 Gap" "-" "{}" "{}" 0.0 25 @ NC_000913 1525663.0 1 "p35-(25)-p10 1525688 Gap" "4.0 bits" 4.012597 1.428290 4.003602 define "p35-p10 1525688 total 5.8" "-" "||" "||" -25 0 @ NC_000913 1525688 1 "p35-p10 1525688 total 5.8" "bits" 5.754395 0.000000 0.000000 @ NC_000913 1525708.0 +1 "p10" " 4.2 bits" 4.194873 -0.276788 0.390972 @ NC_000913 1525686.0 +1 "p35" " 4.8 bits" 4.825061 0.426307 0.334942 define "p35-(22)-p10 1525708 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 1525686.0 1 "p35-(22)-p10 1525708 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 1525708 total 6.7" "-" "||" "||" -22 0 @ NC_000913 1525708 1 "p35-p10 1525708 total 6.7" "bits" 6.685409 0.000000 0.000000 @ NC_000913 1525715.0 +1 "p10" " 2.7 bits" 2.715670 -0.971882 0.165555 @ NC_000913 1525693.0 +1 "p35" " 3.7 bits" 3.709374 -0.167727 0.433399 define "p35-(22)-p10 1525715 Gap" "-" "{}" "{}" 0.0 22 @ NC_000913 1525693.0 1 "p35-(22)-p10 1525715 Gap" "2.3 bits" 2.334525 1.428290 4.003602 define "p35-p10 1525715 total 4.1" "-" "||" "||" -22 0 @ NC_000913 1525715 1 "p35-p10 1525715 total 4.1" "bits" 4.090519 0.000000 0.000000 @ NC_000913 1525745.0 +1 "p10" " 2.6 bits" 2.596713 -1.027781 0.152026 @ NC_000913 1525724.0 +1 "p35" " 6.5 bits" 6.526019 1.331962 0.091436 define "p35-(21)-p10 1525745 Gap" "-" "{}" "{}" 0.0 21 @ NC_000913 1525724.0 1 "p35-(21)-p10 1525745 Gap" "3.3 bits" 3.298901 1.428290 4.003602 define "p35-p10 1525745 total 5.8" "-" "||" "||" -21 0 @ NC_000913 1525745 1 "p35-p10 1525745 total 5.8" "bits" 5.823831 0.000000 0.000000 @ NC_000913 1525747.0 +1 "p10" " 2.8 bits" 2.785041 -0.939284 0.173793 @ NC_000913 1525724.0 +1 "p35" " 6.5 bits" 6.526019 1.331962 0.091436 define "p35-(23)-p10 1525747 Gap" "-" "{}" "{}" 0.0 23 @ NC_000913 1525724.0 1 "p35-(23)-p10 1525747 Gap" "1.4 bits" 1.437284 1.428290 4.003602 define "p35-p10 1525747 total 7.9" "-" "||" "||" -23 0 @ NC_000913 1525747 1 "p35-p10 1525747 total 7.9" "bits" 7.873776 0.000000 0.000000 @ NC_000913 1525781.0 +1 "p10" " 3.1 bits" 3.061061 -0.809579 0.209091 @ NC_000913 1525757.0 +1 "p35" " 3.6 bits" 3.560183 -0.247162 0.402391 define "p35-(24)-p10 1525781 Gap" "-" "{}" "{}" 0.0 24 @ NC_000913 1525757.0 1 "p35-(24)-p10 1525781 Gap" "2.4 bits" 2.427634 1.428290 4.003602 define "p35-p10 1525781 total 4.2" "-" "||" "||" -24 0 @ NC_000913 1525781 1 "p35-p10 1525781 total 4.2" "bits" 4.193610 0.000000 0.000000 * petalfeatures: color rectangle features for the lister program * version = 2.16 of mkpetals 2007 Dec 07 * format: * el: integer; (* edgelinewidth: edge linewidth (integer) *) * c : char; (* color kind: how color is defined: r for RGB, h for HSB *) * (* ---------------------------------------------- *) * eh: real; (* edgeh: edge hue OR red *) * es: real; (* edges: edge saturation OR blue *) * eb: real; (* edgeb: edge brightness OR green *) * (* ---------------------------------------------- *) * fh: real; (* fillh: fill hue OR red *) * fs: real; (* fills: fill saturation OR blue *) * fb: real; (* fillb: fill brightness OR green *) * (* ---------------------------------------------- *) * spare: real; (* spare *) * "name" el c eh es eb fh fs fb spare * * Determine rgb for full saturation: * hsb is 0.000 1 1.0 * rgb is 1 0 0 petal "ir" -1 h 1.0 0.0 1.0 0.000 -1 1.0 0.0 * * Determine rgb for full saturation: * hsb is 0.250 1 1.0 * rgb is 0.499997914 1 0 petal "sd" -1 h 1.0 0.0 1.0 0.250 -1 1.0 0.0 * * Determine rgb for full saturation: * hsb is 0.500 1 1.0 * rgb is 0 1 1 petal "p10" -1 h 1.0 0.0 1.0 0.500 -1 1.0 0.0 * * Determine rgb for full saturation: * hsb is 0.750 1 1.0 * rgb is 0.499998093 0 1 petal "p35" -1 h 1.0 0.0 1.0 0.750 -1 1.0 0.0